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SCNpilot_BF_INOC_scaffold_1221_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1221_curated_1
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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3..416
DNA (414bp) protein (138aa)
Type II secretion system protein E n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TVD3_9FIRM
Type II secretion system protein E {ECO:0000313|EMBL:CDC77413.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily
SCNpilot_BF_INOC_scaffold_1221_curated_2
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

413..1336
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6UBD1_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CDC77411.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1221_curated_3
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

1351..2220
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6U5R8_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CDC77409.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1221_curated_4
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

2232..2645
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6V3Q5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC77407.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1221_curated_5
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

2656..3135
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TYY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC77405.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
SCNpilot_BF_INOC_scaffold_1221_curated_6
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

3147..3857
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TVB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC77403.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
SCNpilot_BF_INOC_scaffold_1221_curated_7
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

3928..6822
DNA (2895bp) protein (965aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6V3P9_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CDC77402.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1221_curated_8
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7046..7492
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2EZI1_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERJ00248.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1221_curated_9
unknown

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7556..7744
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1221_curated_10
unknown

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7686..7874
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1221_curated_11
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7881..8603
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ER40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE05384.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1221_curated_12
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8615..9172
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EPG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE04794.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1221_curated_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9178..9501
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HN12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO18942.1}; Flags: Fragment;; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1221_curated_14
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9485..17722
DNA (8238bp) protein (2746aa)
Superfamily II DNA and RNA helicase n=2 Tax=Dehalobacter RepID=K4KPX7_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:AFV04146.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
Superfamily II DNA and RNA helicase rbh
SCNpilot_BF_INOC_scaffold_1221_curated_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17728..18210
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2RCS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK66334.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1221_curated_16
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18260..18595
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=[Eubacterium] cylindroides T2-87 RepID=D4JDL1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK88283.1}; TaxID=717960 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides T2-87.;"
SCNpilot_BF_INOC_scaffold_1221_curated_17
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18598..19551
DNA (954bp) protein (318aa)
Toprim domain protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DTN9_CLOS4 rbh
Toprim domain protein {ECO:0000313|EMBL:ERJ00241.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
topoisomerase rbh
SCNpilot_BF_INOC_scaffold_1221_curated_18
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19548..19742
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DBR1_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERJ00240.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1221_curated_19
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

19758..20489
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6U5P1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC77379.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1221_curated_20
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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20725..21051
DNA (327bp) protein (109aa)
MocB-like protein id=3716956 bin=GWF2_Clostridiales_38_85 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
mobilization protein
Tax=GWF2_Clostridiales_38_85_curated
SCNpilot_BF_INOC_scaffold_1221_curated_21
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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21056..22417
DNA (1362bp) protein (454aa)
Relaxase/Mobilisation nuclease domain id=3716957 bin=GWF2_Clostridiales_38_85 species=Ruminococcus bromii genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212 rbh
rlx; Relaxase rbh
Tax=GWF2_Clostridiales_38_85_curated
SCNpilot_BF_INOC_scaffold_1221_curated_22
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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24191..24391
DNA (201bp) protein (67aa)
TraG/TraD family id=3716961 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
TraG/TraD family
Tax=GWF2_Clostridiales_38_85_curated
Displaying 22 items

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