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SCNpilot_BF_INOC_scaffold_2843_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2843_curated_1
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..537
DNA (537bp) protein (179aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=2 Tax=Clostridium RepID=A7VX37_9CLOT
ATP-NAD/AcoX kinase
SCNpilot_BF_INOC_scaffold_2843_curated_2
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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561..1025
DNA (465bp) protein (155aa)
Arginine repressor n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IXV7_9FIRM
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
arginine repressor ArgR
SCNpilot_BF_INOC_scaffold_2843_curated_3
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1032..2711
DNA (1680bp) protein (560aa)
DNA repair protein RecN n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6E653_9FIRM rbh
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
DNA repair protein RecN rbh
SCNpilot_BF_INOC_scaffold_2843_curated_4
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2689..3921
DNA (1233bp) protein (411aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
tyrS; Tyrosine-tRNA ligase (EC:6.1.1.1) rbh
Tyrosine--tRNA ligase n=2 Tax=Clostridium RepID=A7VX33_9CLOT rbh
SCNpilot_BF_INOC_scaffold_2843_curated_5
RBG_13_Planctomycetes_44_8b_curated, Physcisphaerae, Planctomycetes, Bacteria

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3935..4195
DNA (261bp) protein (87aa)
Predicted enzyme of the cupin superfamily id=4677586 bin=GWA2_Elusimicrobia_56_46 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
Tax=RBG_13_Planctomycetes_44_8b_curated
SCNpilot_BF_INOC_scaffold_2843_curated_6
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4223..4681)
DNA (459bp) protein (153aa)
ACT domain protein n=2 Tax=Clostridium RepID=A7VX19_9CLOT
ACT domain protein {ECO:0000313|EMBL:EDO60316.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
amino acid-binding ACT protein
SCNpilot_BF_INOC_scaffold_2843_curated_7
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4699..4992)
DNA (294bp) protein (98aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Clostridium sp. CAG:678 RepID=R5KKI7_9CLOT
SCNpilot_BF_INOC_scaffold_2843_curated_8
unknown

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6661..6960
DNA (300bp) protein (100aa)

This feature has no annotations

Displaying 8 items

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