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SCNpilot_BF_INOC_scaffold_2284_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2284_curated_1
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..504
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U550_ETHHY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU26756.1}; Flags: Precursor;; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
SCNpilot_BF_INOC_scaffold_2284_curated_2
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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553..1101
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LSL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS61568.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
spoIIIAH; Stage III sporulation protein AH
SCNpilot_BF_INOC_scaffold_2284_curated_3
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1193..1555
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PBD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS11466.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_2284_curated_4
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1611..2015
DNA (405bp) protein (135aa)
N utilization substance protein B homolog n=1 Tax=Clostridium sp. CAG:352 RepID=R6QTD4_9CLOT
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
NusB antitermination factor
SCNpilot_BF_INOC_scaffold_2284_curated_5
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2012..3253
DNA (1242bp) protein (414aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
xseA; Exodeoxyribonuclease 7 large subunit (EC:3.1.11.6) rbh
Exodeoxyribonuclease 7 large subunit n=1 Tax=Clostridium sp. CAG:352 RepID=R6RXK4_9CLOT rbh
SCNpilot_BF_INOC_scaffold_2284_curated_6
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3243..3455
DNA (213bp) protein (71aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IXV2_9FIRM
SCNpilot_BF_INOC_scaffold_2284_curated_7
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3442..4329
DNA (888bp) protein (296aa)
GGPPS1; Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic (EC:2.5.1.-)
Polyprenyl synthetase n=2 Tax=Clostridium RepID=A7VX40_9CLOT rbh
Polyprenyl synthetase {ECO:0000313|EMBL:CDC03611.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
SCNpilot_BF_INOC_scaffold_2284_curated_8
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4344..4814
DNA (471bp) protein (157aa)
Divergent PAP2 family protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DCI3_CLOS4
Divergent PAP2 family protein {ECO:0000313|EMBL:ERJ00545.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
acid phosphatase/vanadium-dependent haloperoxidase related protein
SCNpilot_BF_INOC_scaffold_2284_curated_9
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5030..6295
DNA (1266bp) protein (422aa)
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7) rbh
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium leptum CAG:27 RepID=R6P0X2_9CLOT rbh
SCNpilot_BF_INOC_scaffold_2284_curated_10
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6317..6910
DNA (594bp) protein (198aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DYS7_9FIRM
deoxyxylulose-5-phosphate synthase
SCNpilot_BF_INOC_scaffold_2284_curated_11
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6888..7694
DNA (807bp) protein (269aa)
Hemolysin TlyA family protein n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NM96_9FIRM rbh
Hemolysin TlyA family protein {ECO:0000313|EMBL:CDF13811.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
hemolysin TlyA family protein rbh
SCNpilot_BF_INOC_scaffold_2284_curated_12
unknown

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7705..7857
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying 12 items

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