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SCNpilot_BF_INOC_scaffold_4546_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_4546_curated_1
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..276)
DNA (276bp) protein (92aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
D-xylose isomerase (EC:5.3.1.5)
Xylose isomerase n=1 Tax=Caloramator australicus RC3 RepID=G0V3V4_9CLOT
SCNpilot_BF_INOC_scaffold_4546_curated_2
Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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420..1217
DNA (798bp) protein (266aa)
Transcriptional regulator, AraC family n=2 Tax=Caldicellulosiruptor RepID=E4S9K0_CALKI
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADQ40054.1}; TaxID=632335 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor kristjanssonii (strain ATCC 700853 / DSM 12137 /; I77R1B).;"
SCNpilot_BF_INOC_scaffold_4546_curated_3
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2687..3301
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GKG3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF08680.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallireducens DSM 15288.;"
SCNpilot_BF_INOC_scaffold_4546_curated_4
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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3409..4770
DNA (1362bp) protein (454aa)
serine protease inhibitor id=3608889 bin=GWF2_Clostridiales_36_10 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
proteinase inhibitor I4 serpin rbh
Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_BF_INOC_scaffold_4546_curated_5
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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4777..6042
DNA (1266bp) protein (422aa)
Serine protease inhibitor n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8R9P5_THETN rbh
serine protease inhibitor rbh
Serine protease inhibitor {ECO:0000313|EMBL:AAM24765.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 /; JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis).;"
SCNpilot_BF_INOC_scaffold_4546_curated_trna_1
unknown

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comp(6090..6162)
DNA (73bp)
transferRNA Arg
SCNpilot_BF_INOC_scaffold_4546_curated_6
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7709..9328)
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79639.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_4546_curated_7
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9537..9977)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G654_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:GAE89548.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
SCNpilot_BF_INOC_scaffold_4546_curated_8
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(9995..10948)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D201_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81850.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
N-acetylmuramoyl-L-alanine amidase
SCNpilot_BF_INOC_scaffold_4546_curated_9
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11202..11543)
DNA (342bp) protein (114aa)
Nitrogen regulatory protein P-II n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TGI3_9CLOT
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EGD46548.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
nitrogen regulatory protein PII
SCNpilot_BF_INOC_scaffold_4546_curated_10
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11557..11811)
DNA (255bp) protein (85aa)
Ammonium transporter NrgA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MTB8_CLOSA
nrgA2; ammonium transporter NrgA
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Displaying 11 items

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