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SCNpilot_BF_INOC_scaffold_6058_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_6058_curated_1
unknown

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2..106
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_6058_curated_2
Carnobacterium sp. AT7, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

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111..845
DNA (735bp) protein (245aa)
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EDP67592.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EDP67592.1};; TaxID=333990 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium sp. AT7.;"
3-ketoacyl-ACP reductase (EC:1.1.1.36)
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Carnobacterium sp. AT7 RepID=A8UBD8_9LACT
SCNpilot_BF_INOC_scaffold_6058_curated_3
Dehalobacter sp. UNSWDHB, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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875..2110
DNA (1236bp) protein (412aa)
3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC:2.3.1.41) rbh
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1339256 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. UNSWDHB.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Dehalobacter sp. UNSWDHB RepID=T0JEE2_9FIRM rbh
SCNpilot_BF_INOC_scaffold_6058_curated_4
Exiguobacterium sp. MH3, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

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2318..2527
DNA (210bp) protein (70aa)
Acetyl-CoA carboxylase n=1 Tax=Exiguobacterium sp. MH3 RepID=U6BBX8_9BACL
acetyl-CoA carboxylase
Acetyl-CoA carboxylase {ECO:0000313|EMBL:AHA29202.1}; TaxID=1399115 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source="Exiguobacterium sp. MH3.;"
SCNpilot_BF_INOC_scaffold_6058_curated_5
Acholeplasma palmae, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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2552..2983
DNA (432bp) protein (144aa)
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase n=1 Tax=Acholeplasma palmae (strain ATCC 49389 / J233) RepID=U4KLF8_ACHPJ
fabZ; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase {ECO:0000313|EMBL:CCV64667.1}; TaxID=38986 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma palmae.;"
SCNpilot_BF_INOC_scaffold_6058_curated_6
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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3848..4288
DNA (441bp) protein (147aa)
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PQ77_9CLOT
acetyl-CoA carboxylase, biotin carboxylase
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:ERI92179.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
SCNpilot_BF_INOC_scaffold_6058_curated_7
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4288..5142
DNA (855bp) protein (285aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=2 Tax=Clostridiales RepID=B0A8I2_9FIRM rbh
acetyl-CoA carboxylase, carboxyl transferase, beta subunit rbh
SCNpilot_BF_INOC_scaffold_6058_curated_8
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5179..5967
DNA (789bp) protein (263aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2) rbh
acetyl-CoA carboxylase subunit alpha n=1 Tax=Clostridium arbusti RepID=UPI0002896B72 rbh
SCNpilot_BF_INOC_scaffold_6058_curated_9
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6062..6520
DNA (459bp) protein (153aa)
MarR-family transcriptional regulator n=1 Tax=Clostridium sp. CAG:230 RepID=R6DC52_9CLOT
MarR family protein {ECO:0000313|EMBL:KIE45731.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
marR family protein
SCNpilot_BF_INOC_scaffold_6058_curated_10
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6582..6887)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MSW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY92824.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
SCNpilot_BF_INOC_scaffold_6058_curated_11
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7763..9712
DNA (1950bp) protein (650aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129) rbh
Penicillin-binding protein, 1A family n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F2K5_CLOS4 rbh
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ERI99491.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
SCNpilot_BF_INOC_scaffold_6058_curated_12
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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9754..10332
DNA (579bp) protein (193aa)
Cupin domain/Helix-turn-helix protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T994_9EURY
Cupin domain/Helix-turn-helix protein
Cupin domain/Helix-turn-helix protein {ECO:0000313|EMBL:AGN26201.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
SCNpilot_BF_INOC_scaffold_6058_curated_13
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10337..11194
DNA (858bp) protein (286aa)
AMP-binding enzyme n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPM1_9CLOT
AMP-binding enzyme {ECO:0000313|EMBL:EDO62683.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
AMP-dependent synthetase and ligase
Displaying 13 items

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