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SCNpilot_BF_INOC_scaffold_2970_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2970_curated_1
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..395)
DNA (393bp) protein (131aa)
GTPase HflX n=2 Tax=Clostridium RepID=A7VSB8_9CLOT
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
GTPase
SCNpilot_BF_INOC_scaffold_2970_curated_2
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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632..2098
DNA (1467bp) protein (489aa)
L-aspartate oxidase (EC:1.4.3.16) rbh
L-aspartate oxidase n=3 Tax=root RepID=R5MYZ4_9FIRM rbh
L-aspartate oxidase {ECO:0000313|EMBL:CCY90222.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
SCNpilot_BF_INOC_scaffold_2970_curated_3
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2122..2913
DNA (792bp) protein (264aa)
nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC:2.4.2.19) rbh
Nicotinate-nucleotide diphosphorylase (Carboxylating) n=2 Tax=root RepID=R5MXZ5_9FIRM rbh
Nicotinate-nucleotide diphosphorylase (Carboxylating) {ECO:0000313|EMBL:CCY90221.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
SCNpilot_BF_INOC_scaffold_2970_curated_4
unknown

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4019..4282
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2970_curated_5
unknown

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comp(4498..5262)
DNA (765bp) protein (255aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2970_curated_6
unknown

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5977..6180
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2970_curated_7
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6242..8197
DNA (1956bp) protein (652aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
Signal transduction histidine kinase, LytS n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9ST97_CLOC7 rbh
signal transduction histidine kinase LytS rbh
SCNpilot_BF_INOC_scaffold_2970_curated_8
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8175..9059
DNA (885bp) protein (295aa)
Response regulator receiver and SARP domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TF13_9CLOT rbh
Response regulator receiver and SARP domain protein {ECO:0000313|EMBL:EGD46951.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
response regulator containing CheY-like receiver and SARP domains
SCNpilot_BF_INOC_scaffold_2970_curated_9
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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9378..11375
DNA (1998bp) protein (666aa)
Uncharacterized protein {ECO:0000313|EMBL:KJJ38780.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
Filamentous hemagglutinin family outer membrane protein id=2290321 bin=GWA2_Polynucleobacter_45_21 species=Thioalkalimicrobium cyclicum genus=Thioalkalimicrobium taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
C-type lectin domain-containing protein
Displaying 9 items

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