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SCNpilot_BF_INOC_scaffold_2974_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2974_curated_1
Clostridium sp. CAG:571, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(81..788)
DNA (708bp) protein (236aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Clostridium sp. CAG:571 RepID=R5YH03_9CLOT
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1262822 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:571.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_2974_curated_2
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

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comp(881..1246)
DNA (366bp) protein (122aa)
GTPase Der n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7APT5_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
der; GTPase Der
SCNpilot_BF_INOC_scaffold_2974_curated_3
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2159..3475)
DNA (1317bp) protein (439aa)
Putative FeS-containing Cyanobacterial-specific oxidoreductase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EFN1_9CLOT rbh
Putative FeS-containing Cyanobacterial-specific oxidoreductase {ECO:0000313|EMBL:EEG29660.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_2974_curated_4
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3589..3771)
DNA (183bp) protein (61aa)
50S ribosomal protein L32 n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IB95_9FIRM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_2974_curated_5
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3799..4296)
DNA (498bp) protein (166aa)
Putative ACR COG1399 n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IXG8_9FIRM
Putative ACR COG1399 {ECO:0000313|EMBL:CDB42697.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Predicted metal-binding, possibly nucleic acid-binding protein
SCNpilot_BF_INOC_scaffold_2974_curated_6
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4376..5704)
DNA (1329bp) protein (443aa)
O-antigen polymerase family protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NJ83_9CLOT
O-antigen polymerase family protein {ECO:0000313|EMBL:CDC12208.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
O-antigen polymerase
SCNpilot_BF_INOC_scaffold_2974_curated_7
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5790..6209)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09560.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_2974_curated_8
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6255..7592)
DNA (1338bp) protein (446aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
glucose-6-phosphate isomerase (EC:5.3.1.9) rbh
Glucose-6-phosphate isomerase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPT9_9CLOT rbh
SCNpilot_BF_INOC_scaffold_2974_curated_9
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7680..8921)
DNA (1242bp) protein (414aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4) rbh
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CDZ24506.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CDZ24506.1};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
Putative serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DB42_CLOS4 rbh
SCNpilot_BF_INOC_scaffold_2974_curated_10
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9070..9696)
DNA (627bp) protein (209aa)
Flavin reductase {ECO:0000313|EMBL:EJF41313.1}; EC=1.7.-.- {ECO:0000313|EMBL:EJF41313.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Flavin reductase n=1 Tax=Clostridium sp. MSTE9 RepID=J1H7N8_9CLOT rbh
multimeric flavodoxin WrbA rbh
Displaying 10 items

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