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SCNpilot_BF_INOC_scaffold_5738_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_5738_curated_1
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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3..200
DNA (198bp) protein (66aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=7 Tax=Clostridium thermocellum RepID=A3DIK4_CLOTH
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP68970.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
SCNpilot_BF_INOC_scaffold_5738_curated_2
unknown

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313..1224
DNA (912bp) protein (304aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_5738_curated_3
unknown

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comp(1042..1494)
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_5738_curated_4
unknown

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comp(1600..2028)
DNA (429bp) protein (143aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_5738_curated_5
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2308..3459)
DNA (1152bp) protein (384aa)
Ig-like domain-containing surface protein n=1 Tax=Saprospira grandis DSM 2844 RepID=J1I659_9SPHI
Ig-like domain-containing surface protein {ECO:0000313|EMBL:EJF54250.1}; TaxID=694433 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis DSM 2844.;"
cell wall/surface repeat-containing protein
SCNpilot_BF_INOC_scaffold_5738_curated_6
unknown

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comp(3425..3772)
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_5738_curated_7
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3772..5130)
DNA (1359bp) protein (453aa)
Putative uncharacterized protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U300_ETHHY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU26367.1}; Flags: Precursor;; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
SCNpilot_BF_INOC_scaffold_5738_curated_8
unknown

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comp(5562..5675)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_5738_curated_9
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5672..6427)
DNA (756bp) protein (252aa)
Prepilin peptidase n=1 Tax=Clostridium sp. CAG:91 RepID=R6VWW6_9CLOT
Prepilin peptidase {ECO:0000313|EMBL:CDD01590.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
PppA; Signal peptidase, cleaves prepilin-like proteins
SCNpilot_BF_INOC_scaffold_5738_curated_10
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6667..8358
DNA (1692bp) protein (564aa)
Type II secretion system protein E n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U2Z3_ETHHY rbh
tapB; Type IV pilus assembly protein TapB rbh
Type IV pilus assembly protein TapB {ECO:0000313|EMBL:CDZ23360.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_5738_curated_11

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comp(8675..8875)
DNA (201bp) protein (67aa)
Marine sediment metagenome DNA, contig: S06H3_S08380 {ECO:0000313|EMBL:GAI25300.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 11 items

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