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SCNpilot_BF_INOC_scaffold_1756_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1756_curated_1
unknown

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201..341
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1756_curated_2
Paenibacillus sp. MAEPY2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1116..2216
DNA (1101bp) protein (367aa)
Beta-lactamase n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D8G2_PAESJ rbh
Beta-lactamase {ECO:0000313|EMBL:KGP78720.1}; TaxID=1395587 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MAEPY2.;"
beta-lactamase rbh
SCNpilot_BF_INOC_scaffold_1756_curated_3
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2403..2918
DNA (516bp) protein (172aa)
Putative small multi-drug export protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6N9W6_9CLOT
Putative small multi-drug export protein {ECO:0000313|EMBL:CDC08838.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
Predicted membrane protein
SCNpilot_BF_INOC_scaffold_1756_curated_4
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3286..4074
DNA (789bp) protein (263aa)
chemotaxis protein CheY n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D483
response regulator receiver protein
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
SCNpilot_BF_INOC_scaffold_1756_curated_5
unknown

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comp(4081..4251)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1756_curated_6
unknown

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4319..4594
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1756_curated_7
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4616..7339
DNA (2724bp) protein (908aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
histidine kinase n=1 Tax=Clostridium beijerinckii RepID=UPI000317BBBF rbh
PAS/PAC sensor signal transduction histidine kinase rbh
SCNpilot_BF_INOC_scaffold_1756_curated_8
Caldithrix abyssi, Caldithrix, Bacteria

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7336..9189
DNA (1854bp) protein (618aa)
Glycoside hydrolase family 5 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XTT3_9BACT rbh
Glycoside hydrolase family 5 {ECO:0000313|EMBL:EHO42700.1}; Flags: Precursor;; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
glycoside hydrolase rbh
SCNpilot_BF_INOC_scaffold_1756_curated_9
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9200..10162
DNA (963bp) protein (321aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AW17_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS13964.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
inosine/uridine-preferring nucleoside hydrolase
SCNpilot_BF_INOC_scaffold_1756_curated_10
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10345..11313)
DNA (969bp) protein (323aa)
excisionase family DNA binding domain-containing protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E300F6 rbh
excisionase family DNA binding domain-containing protein rbh
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:ADY57124.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
SCNpilot_BF_INOC_scaffold_1756_curated_11
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11602..12831
DNA (1230bp) protein (410aa)
Putative alpha-1,2-mannosidase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZG3_9FIRM rbh
Putative alpha-1,2-mannosidase {ECO:0000313|EMBL:EDS75810.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
alpha-1,2-mannosidase
Displaying 11 items

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