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SCNpilot_BF_INOC_scaffold_1202_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1202_curated_1
unknown

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comp(2..76)
DNA (75bp) protein (25aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1202_curated_2
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(282..797)
DNA (516bp) protein (172aa)
Dockerin type I repeat protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VEE9_9CLOT
Dockerin type I repeat protein {ECO:0000313|EMBL:EDO58152.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Beta-N-acetylglucosaminidase
SCNpilot_BF_INOC_scaffold_1202_curated_3
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1011..1268)
DNA (258bp) protein (86aa)
Glycoside Hydrolase Family 73 protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E2N5_9FIRM
Glycoside Hydrolase Family 73 protein {ECO:0000313|EMBL:CCX83027.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
Beta-N-acetylglucosaminidase
SCNpilot_BF_INOC_scaffold_1202_curated_4
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

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1498..1770
DNA (273bp) protein (91aa)
Uncharacterized protein (Fragment) n=1 Tax=Lottia gigantea RepID=V3ZLW9_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:ESO83405.1}; Flags: Fragment;; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
SCNpilot_BF_INOC_scaffold_1202_curated_5
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1669..3216)
DNA (1548bp) protein (516aa)
Beta-glucanase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FSR5_CLOPA
Beta-glucanase {ECO:0000313|EMBL:ETD67195.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
glycoside hydrolase
SCNpilot_BF_INOC_scaffold_1202_curated_6
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3541..4251
DNA (711bp) protein (237aa)
membrane protein n=1 Tax=Desulfitobacterium sp. PCE1 RepID=UPI00037E758D rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFL98975.1}; Flags: Precursor;; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
SCNpilot_BF_INOC_scaffold_1202_curated_7
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4700..7420
DNA (2721bp) protein (907aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z316_EUBE2 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACR72606.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
SCNpilot_BF_INOC_scaffold_1202_curated_8
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7452..8219
DNA (768bp) protein (256aa)
rfbF; glucose-1-phosphate cytidylyltransferase RfbF (EC:2.7.7.33) rbh
Glucose-1-phosphate cytidylyltransferase n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F3K3_CLOSG rbh
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:KJS49031.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
SCNpilot_BF_INOC_scaffold_1202_curated_9
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8226..9284
DNA (1059bp) protein (353aa)
rfbG; CDP-glucose 4,6-dehydratase RfbG (EC:4.2.1.45) rbh
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H913_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CDE36164.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
SCNpilot_BF_INOC_scaffold_1202_curated_10
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9288..10628
DNA (1341bp) protein (447aa)
Lipopolysaccharide biosynthesis protein RfbH n=1 Tax=Clostridium sp. CAG:632 RepID=R5KE29_9CLOT rbh
Lipopolysaccharide biosynthesis protein RfbH {ECO:0000313|EMBL:CCY59202.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis rbh
SCNpilot_BF_INOC_scaffold_1202_curated_11
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10631..11047
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N6Z2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF59157.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
SCNpilot_BF_INOC_scaffold_1202_curated_12
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11137..12840
DNA (1704bp) protein (568aa)
Acetolactate synthase (EC:2.2.1.6) rbh
Acetolactate synthase {ECO:0000313|EMBL:AIF53726.1}; EC=2.2.1.6 {ECO:0000313|EMBL:AIF53726.1};; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
Acetolactate synthase n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZY2_9CLOT rbh
SCNpilot_BF_INOC_scaffold_1202_curated_13
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12871..13797
DNA (927bp) protein (309aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2E2_9CLOT
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EEG73566.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
NAD-dependent epimerase/dehydratase
SCNpilot_BF_INOC_scaffold_1202_curated_14
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13886..14833
DNA (948bp) protein (316aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5Y1H8_9FIRM rbh
glycosyl transferase family 2 rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:AIF53724.1}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
SCNpilot_BF_INOC_scaffold_1202_curated_15
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14873..16288
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GGJ5_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO38800.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
SCNpilot_BF_INOC_scaffold_1202_curated_16
Anaerococcus tetradius, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16381..17061)
DNA (681bp) protein (227aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=525255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus tetradius ATCC 35098.;"
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CIN5_9FIRM
SCNpilot_BF_INOC_scaffold_1202_curated_17
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17830..18183
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VZ54_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ23864.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_1202_curated_18
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18180..18605
DNA (426bp) protein (142aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Clostridium RepID=A7VZ55_9CLOT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDC05601.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1202_curated_19
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18635..19339
DNA (705bp) protein (235aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6P6R2_9CLOT rbh
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDC05602.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein rbh
Displaying 19 items

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