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SCNpilot_BF_INOC_scaffold_1460_curated

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1460_curated_1
unknown

Not on your lists

2..94
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1460_curated_2
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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87..743
DNA (657bp) protein (219aa)
RNA polymerase sigma-70 factor, sigma-B/F/G subfamily n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHC0_9CLOT
RNA polymerase sigma-70 factor, sigma-B/F/G subfamily {ECO:0000313|EMBL:EEG29207.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
RNA polymerase sigma factor, sigma-70 family
SCNpilot_BF_INOC_scaffold_1460_curated_3
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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921..1415
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FMD8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMS71496.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
membrane flanked domain-containing protein
SCNpilot_BF_INOC_scaffold_1460_curated_4
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1419..2102
DNA (684bp) protein (228aa)
Putative membrane protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FHZ9_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EMS71455.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
membrane flanked domain-containing protein
SCNpilot_BF_INOC_scaffold_1460_curated_5
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2198..2830
DNA (633bp) protein (211aa)
Putative membrane protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FHZ9_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EMS71455.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
SCNpilot_BF_INOC_scaffold_1460_curated_6
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2865..3620)
DNA (756bp) protein (252aa)
tgl; protein-glutamine gamma-glutamyltransferase (EC:2.3.2.13)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037D8097
Uncharacterized protein {ECO:0000313|EMBL:EJF38470.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
SCNpilot_BF_INOC_scaffold_1460_curated_7
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3611..4537)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Clostridium arbusti RepID=UPI000287E0C1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ23449.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_1460_curated_8
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4650..5321)
DNA (672bp) protein (224aa)
ADH2; Aldehyde-alcohol dehydrogenase 2 (EC:1.1.1.1)
Alcohol dehydrogenase, iron-dependent n=2 Tax=Clostridium RepID=A7VWI1_9CLOT rbh
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
SCNpilot_BF_INOC_scaffold_1460_curated_9
unknown

Not on your lists

7067..7633
DNA (567bp) protein (189aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1460_curated_10
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7820..8230
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6EQ33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA92032.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1460_curated_11
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8231..8896)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GMV7_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO37229.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
SCNpilot_BF_INOC_scaffold_1460_curated_12
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9340..9585
DNA (246bp) protein (82aa)
Transition state regulatory protein AbrB n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q3L4_CLONN
AbrB family transcriptional regulator
Transition state regulatory protein AbrB {ECO:0000313|EMBL:ABK62630.1}; TaxID=386415 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi (strain NT).;"
SCNpilot_BF_INOC_scaffold_1460_curated_13
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9654..10334)
DNA (681bp) protein (227aa)
cAMP-binding protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LWP2_CLOCD
Crp/Fnr family transcriptional regulator
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:CDZ24543.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_1460_curated_14
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

10580..10822
DNA (243bp) protein (81aa)
SpoVT/AbrB family regulatory protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9EUZ8_CLOSG
AbrB family transcriptional regulator
Tax=BJP_IG2102_Coriobacteriales_64_17
SCNpilot_BF_INOC_scaffold_1460_curated_15
GWD2_Clostridiales_32_19_curated, Clostridiales, Bacteria

Not on your lists

11012..11713
DNA (702bp) protein (234aa)
Iron-sulfur binding protein id=1846065 bin=GWD2_Clostridiales_32_19 species=Fusobacterium varium genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWD2_Clostridiales_32_19 organism_group=Firmicute organism_desc=a85 rbh
hypothetical protein rbh
Tax=GWD2_Clostridiales_32_19_curated
SCNpilot_BF_INOC_scaffold_1460_curated_16
unknown

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comp(12241..12402)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1460_curated_17
unknown

Not on your lists

comp(14189..14983)
DNA (795bp) protein (265aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1460_curated_18
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(14995..17412)
DNA (2418bp) protein (806aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2DF11
hypothetical protein
Tax=GWF2_Clostridiales_38_85_curated
SCNpilot_BF_INOC_scaffold_1460_curated_19
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

Not on your lists

comp(17735..19573)
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2EG82_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:ERJ13626.1}; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_1460_curated_20
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

Not on your lists

comp(19636..20853)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2EG82_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERJ13626.1}; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1460_curated_21
Bacillus sp. JCM 19046, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20865..21032)
DNA (168bp) protein (56aa)
bglX3; periplasmic beta-glucosidase BglX (EC:3.2.1.21)
Periplasmic beta-glucosidase BglX n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MTC6_9CLOT
Beta-glucosidase {ECO:0000313|EMBL:GAF18122.1}; TaxID=1460640 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. JCM 19046.;"
Displaying 21 items

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