ggKbase home page

SCNpilot_BF_INOC_scaffold_1983_curated

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1983_curated_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..782)
DNA (780bp) protein (260aa)
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EJF42179.1}; EC=3.6.3.8 {ECO:0000313|EMBL:EJF42179.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
ATPase n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003800CEE
calcium-translocating P-type ATPase
SCNpilot_BF_INOC_scaffold_1983_curated_2
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(869..1837)
DNA (969bp) protein (323aa)
putative Na+/Ca+ antiporter n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2E32E
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
SCNpilot_BF_INOC_scaffold_1983_curated_3
unknown

Not on your lists

2087..2617
DNA (531bp) protein (177aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1983_curated_4
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2704..4419
DNA (1716bp) protein (572aa)
Phosphomannomutase n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GIS3_9FIRM rbh
Phosphomannomutase {ECO:0000313|EMBL:CCY17345.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
conserved hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_1983_curated_5
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4824..5957
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Paenibacillus alvei A6-6i-x RepID=S9UH67_PAEAL
Uncharacterized protein {ECO:0000313|EMBL:EPY09780.1}; TaxID=1117109 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei A6-6i-x.;"
S-layer domain-containing protein
SCNpilot_BF_INOC_scaffold_1983_curated_6
unknown

Not on your lists

6133..6231
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1983_curated_7
unknown

Not on your lists

6454..7581
DNA (1128bp) protein (376aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1983_curated_8
unknown

Not on your lists

7660..8373
DNA (714bp) protein (238aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1983_curated_9
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

8375..9868
DNA (1494bp) protein (498aa)
Putative uncharacterized protein id=4206707 bin=GWF2_Clostridiales_36_10 species=Subdoligranulum sp. 4_3_54A2FAA genus=Subdoligranulum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute rbh
radical SAM family protein rbh
Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_BF_INOC_scaffold_1983_curated_10
unknown

Not on your lists

9865..10026
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1983_curated_11
Dehalobacter sp. UNSWDHB, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10142..10447
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Dehalobacter sp. UNSWDHB RepID=T0I3T7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQB20040.1}; TaxID=1339256 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. UNSWDHB.;"
SCNpilot_BF_INOC_scaffold_1983_curated_12
unknown

Not on your lists

11419..11547
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1983_curated_13
unknown

Not on your lists

11893..12144
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1983_curated_14
Clostridium sp. CAG:557, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12222..12827)
DNA (606bp) protein (202aa)
CotJC n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037F8B61 rbh
Manganese containing catalase {ECO:0000313|EMBL:CDB23394.1}; TaxID=1262819 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:557.;"
manganese containing catalase rbh
SCNpilot_BF_INOC_scaffold_1983_curated_15
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12827..13090)
DNA (264bp) protein (88aa)
Spore coat protein CotJB n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U560_ETHHY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ24851.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_1983_curated_16
Fomitopsis pinicola, Fomitopsis, Polyporales, Agaricomycetes, Basidiomycota, Fungi

Not on your lists

comp(13087..14136)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Fomitopsis pinicola (strain FP-58527) RepID=S8DVB4_FOMPI
Uncharacterized protein {ECO:0000313|EMBL:EPS96542.1}; TaxID=743788 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Polyporales; Fomitopsis.;" source="Fomitopsis pinicola (strain FP-58527) (Brown rot fungus).;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1983_curated_17
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14406..14603)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI0003720B77
ABC transporter permease/ATP-binding protein
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDC65054.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
SCNpilot_BF_INOC_scaffold_1983_curated_18
unknown

Not on your lists

15649..15957
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1983_curated_19
unknown

Not on your lists

16119..16562
DNA (444bp) protein (148aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1983_curated_20
Paenibacillus sp. P1XP2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16633..17154)
DNA (522bp) protein (174aa)
Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6M0_PHYPA
Uncharacterized protein {ECO:0000313|EMBL:KHF33257.1}; TaxID=1472719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P1XP2.;"
hypothetical protein
Displaying 20 items

View Taxonomy