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SCNpilot_BF_INOC_scaffold_2392_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2392_curated_1
Acinetobacter sp. NIPH 236, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..1627)
DNA (1626bp) protein (542aa)
Fatty acid oxidation complex subunit alpha n=1 Tax=Acinetobacter sp. ANC 3862 RepID=N9LRJ5_9GAMM rbh
Fatty acid oxidation complex subunit alpha {ECO:0000256|SAAS:SAAS00051741}; TaxID=1217711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 236.;"
fadB; fatty oxidation complex alpha subunit rbh
SCNpilot_BF_INOC_scaffold_2392_curated_2
Acinetobacter sp. ANC 3862, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2235..3299
DNA (1065bp) protein (355aa)
Uncharacterized protein n=2 Tax=Acinetobacter RepID=N8QYV8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:ENW98847.1}; TaxID=1217705 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. ANC 3862.;"
diguanylate cyclase rbh
SCNpilot_BF_INOC_scaffold_2392_curated_3
Acinetobacter sp. ANC 3862, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3458..4372
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. ANC 3862 RepID=N9N7P6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:ENW98846.1}; TaxID=1217705 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. ANC 3862.;"
lpxO; beta-hydroxylase rbh
SCNpilot_BF_INOC_scaffold_2392_curated_4
unknown

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4909..5247
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2392_curated_5
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5443..6552)
DNA (1110bp) protein (370aa)
glycine hydroxymethyltransferase (EC:2.1.2.1) rbh
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
Serine hydroxymethyltransferase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U8P1_ETHHY rbh
SCNpilot_BF_INOC_scaffold_2392_curated_6
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

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7012..7890
DNA (879bp) protein (293aa)
glucan endo-1,3-beta-D-glucosidase (EC:3.2.1.39)
Laminarinase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YU98_9GAMM
Laminarinase {ECO:0000313|EMBL:EAS48160.1}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma proteobacterium HTCC2207.;"
SCNpilot_BF_INOC_scaffold_2392_curated_7
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8149..9027
DNA (879bp) protein (293aa)
Beta-glucanase/beta-glucan synthetase n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EAS2_THECK
beta-glucanase/beta-glucan synthetase
Beta-glucanase/beta-glucan synthetase {ECO:0000313|EMBL:AGA57343.1}; Flags: Precursor;; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
SCNpilot_BF_INOC_scaffold_2392_curated_8
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9098..9889)
DNA (792bp) protein (264aa)
Dihydropteroate synthase DHPS n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I636_CLOCE
dihydropteroate synthase
Dihydropteroate synthase DHPS {ECO:0000313|EMBL:ACL76801.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
SCNpilot_BF_INOC_scaffold_2392_curated_9
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9950..11680)
DNA (1731bp) protein (577aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
Methylenetetrahydrofolate reductase n=1 Tax=Clostridium intestinale URNW RepID=U2NNK8_9CLOT rbh
homocysteine S-methyltransferase rbh
SCNpilot_BF_INOC_scaffold_2392_curated_10
unknown

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11866..12243
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EHP0_CLOPA
hypothetical protein
SCNpilot_BF_INOC_scaffold_2392_curated_11
unknown

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comp(12409..13404)
DNA (996bp) protein (332aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2392_curated_12
unknown

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comp(13423..14397)
DNA (975bp) protein (325aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2392_curated_13
unknown

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14832..15077
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2392_curated_14
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15135..16877)
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IXU9_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EOS23742.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
abortive phage infection protein rbh
SCNpilot_BF_INOC_scaffold_2392_curated_15
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16994..17296)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LSP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS61790.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
XRE family transcriptional regulator
SCNpilot_BF_INOC_scaffold_2392_curated_16
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17417..17896
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L070_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL01451.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
SCNpilot_BF_INOC_scaffold_2392_curated_17
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18151..18777)
DNA (627bp) protein (209aa)
V-type ATP synthase subunit D n=1 Tax=Clostridium sp. MSTE9 RepID=J1H3X7_9CLOT
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
V-type ATPase subunit D
SCNpilot_BF_INOC_scaffold_2392_curated_18
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18846..19631)
DNA (786bp) protein (262aa)
Archaeal/vacuolar-type H+-ATPase subunit B (EC:3.6.3.14) rbh
V-type ATP synthase beta chain n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8M0_9FIRM rbh
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Displaying 18 items

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