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SCNpilot_BF_INOC_scaffold_3009_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3009_curated_1
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..986
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003746006 rbh
HSR1-like GTP-binding protein rbh
Tax=BJP_IG2158_Thermincola_46_17
SCNpilot_BF_INOC_scaffold_3009_curated_2
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(958..2967)
DNA (2010bp) protein (670aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GFV6_EUBLK rbh
putative membrane protein rbh
Putative membrane protein {ECO:0000313|EMBL:CDM68970.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
SCNpilot_BF_INOC_scaffold_3009_curated_3
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2957..3724)
DNA (768bp) protein (256aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECK3_9CLOT rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG30819.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
ABC-type antimicrobial peptide transport system, ATPase component rbh
SCNpilot_BF_INOC_scaffold_3009_curated_4
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3833..4846)
DNA (1014bp) protein (338aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JKP0_CELLD rbh
integral membrane sensor signal transduction histidine kinase rbh
SCNpilot_BF_INOC_scaffold_3009_curated_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4843..5502)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFD3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98546.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_3009_curated_6
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5704..6087
DNA (384bp) protein (128aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. CAG:964 RepID=R6UPK9_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDC82121.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
helix-turn-helix domain-containing protein
SCNpilot_BF_INOC_scaffold_3009_curated_7
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6105..7157
DNA (1053bp) protein (351aa)
Putative peptidase S10 Flavivirus NS3 serine protease n=1 Tax=Clostridium sp. CAG:413 RepID=R6NX09_9CLOT
Putative peptidase S10 Flavivirus NS3 serine protease {ECO:0000313|EMBL:CDC12939.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
primosome subunit DnaD
SCNpilot_BF_INOC_scaffold_3009_curated_8
Clostridium sp. CAG:557, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7160..8131
DNA (972bp) protein (324aa)
DNA replication protein DnaC n=1 Tax=Clostridium sp. CAG:557 RepID=R6GDH0_9CLOT
DNA replication protein DnaC {ECO:0000313|EMBL:CDB23478.1}; TaxID=1262819 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:557.;"
DNA replication protein
SCNpilot_BF_INOC_scaffold_3009_curated_9
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8389..9681)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SV58_SYNGF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY55558.1}; Flags: Precursor;; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
SCNpilot_BF_INOC_scaffold_3009_curated_10
unknown

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comp(9722..9817)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_3009_curated_11
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9814..10176)
DNA (363bp) protein (121aa)
Molybdopterin oxidoreductase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G4P1_CLOPA
Molybdopterin oxidoreductase {ECO:0000313|EMBL:KGG80942.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_3009_curated_12
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10177..10890)
DNA (714bp) protein (238aa)
Thioredoxin reductase n=1 Tax=Blautia sp. CAG:52 RepID=R6G4W1_9FIRM
Thioredoxin reductase {ECO:0000313|EMBL:CDB20538.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
Thioredoxin reductase
Displaying 12 items

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