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SCNpilot_BF_INOC_scaffold_582_curated

Search features with annotation key words

Displaying items 31-58 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_582_curated_31
Brachyspira hampsonii, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

26900..27496
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Brachyspira hampsonii 30446 RepID=L0X0B5_9SPIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKV56711.1}; TaxID=1289135 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira hampsonii 30446.;"
SCNpilot_BF_INOC_scaffold_582_curated_32
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27612..28025
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FR43_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMS70933.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_582_curated_33
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28152..28337
DNA (186bp) protein (62aa)
Small, acid-soluble spore protein, alpha/beta type n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSG2_9FIRM
Small, acid-soluble spore protein, alpha/beta type {ECO:0000313|EMBL:EDN01201.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
small acid-soluble spore protein alpha/beta type
SCNpilot_BF_INOC_scaffold_582_curated_34
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28829..29296)
DNA (468bp) protein (156aa)
Phage tail protein n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M8K8_9BACL
Phage tail protein {ECO:0000313|EMBL:EST54210.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
phage tail protein
SCNpilot_BF_INOC_scaffold_582_curated_35
Desulfosporosinus sp. HMP52, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29517..30506)
DNA (990bp) protein (330aa)
Guanosine polyphosphate synthetase/pyrophosphohydrolase n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WBT2_DESOD rbh
Guanosine polyphosphate pyrophosphohydrolase {ECO:0000313|EMBL:KGK87411.1}; TaxID=1487923 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. HMP52.;"
guanosine polyphosphate synthetase/pyrophosphohydrolase rbh
SCNpilot_BF_INOC_scaffold_582_curated_36
Bacillus thermotolerans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30740..31615)
DNA (876bp) protein (292aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D237_PELTS rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:KKB36992.1}; TaxID=1221996 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus thermotolerans.;"
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_582_curated_37
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31771..32520)
DNA (750bp) protein (250aa)
Rifampin ADP-ribosyl transferase n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GH31_9FIRM rbh
rRNA adenine methyltransferase rbh
rRNA adenine methyltransferase {ECO:0000313|EMBL:AHF07244.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallireducens DSM 15288.;"
SCNpilot_BF_INOC_scaffold_582_curated_38
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32701..33051)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W540_DESAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV61392.1}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM; B-1644).;"
SCNpilot_BF_INOC_scaffold_582_curated_39
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

comp(33057..33251)
DNA (195bp) protein (65aa)
Uncharacterized protein id=2084455 bin=GWB2_Clostridiales_37_7 species=Desulfosporosinus meridiei genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
hypothetical protein
Tax=GWB2_Clostridiales_37_7_curated
SCNpilot_BF_INOC_scaffold_582_curated_40
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33271..33546)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W539_DESAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV61391.1}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM; B-1644).;"
SCNpilot_BF_INOC_scaffold_582_curated_41
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33572..34042)
DNA (471bp) protein (157aa)
GNAT family acetyltransferase (EC:2.3.1.-)
Acetyltransferase GNAT family {ECO:0000313|EMBL:AFA50127.1}; EC=2.3.1.- {ECO:0000313|EMBL:AFA50127.1};; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Acetyltransferase GNAT family n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LBK4_ACEWD
SCNpilot_BF_INOC_scaffold_582_curated_42
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34130..34684)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SUJ4_SYNGF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY55487.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
SCNpilot_BF_INOC_scaffold_582_curated_43
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34784..35191)
DNA (408bp) protein (136aa)
Cytidine deaminase n=3 Tax=Clostridium botulinum RepID=C3KUZ0_CLOB6
cytidine deaminase
Cytidine and deoxycytidylate deaminase zinc-binding region family protein {ECO:0000313|EMBL:AJE13109.1}; TaxID=1408283 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CDC_1436.;"
SCNpilot_BF_INOC_scaffold_582_curated_44
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35458..36852)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FSH3_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EMS73281.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
parC; topoisomerase IV subunit B rbh
SCNpilot_BF_INOC_scaffold_582_curated_45
unknown

Not on your lists

comp(36899..37009)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_582_curated_46
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(37006..41595)
DNA (4590bp) protein (1530aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MMJ2_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB78740.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
hypothetical protein DUF3883 rbh
SCNpilot_BF_INOC_scaffold_582_curated_47
Prevotella bryantii, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41711..42658)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B5A01D
Uncharacterized protein {ECO:0000313|EMBL:EFI72154.1}; TaxID=752555 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella bryantii B14.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_582_curated_48
Prevotella bryantii, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42633..44600)
DNA (1968bp) protein (656aa)
SNF2 N-terminal domain protein n=1 Tax=Prevotella bryantii B14 RepID=D8DW95_PREBR rbh
SNF2 N-terminal domain protein {ECO:0000313|EMBL:EFI72155.1}; TaxID=752555 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella bryantii B14.;"
SNF2-related protein rbh
SCNpilot_BF_INOC_scaffold_582_curated_49
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44616..45902)
DNA (1287bp) protein (429aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KPK7_CLOPH rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX43281.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
SCNpilot_BF_INOC_scaffold_582_curated_50
Bacillus pumilus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(45918..46847)
DNA (930bp) protein (310aa)
Restriction endonuclease n=1 Tax=Bacillus pumilus RepID=T2F959_BACPU
Restriction endonuclease {ECO:0000313|EMBL:AGV74271.1}; TaxID=1408 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus pumilus (Bacillus mesentericus).;"
SCNpilot_BF_INOC_scaffold_582_curated_51
Streptobacillus moniliformis, Streptobacillus, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(46847..48202)
DNA (1356bp) protein (452aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=519441 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Streptobacillus.;" source="Streptobacillus moniliformis (strain ATCC 14647 / DSM 12112 / NCTC; 10651 / 9901).;"
Cytosine-specific methyltransferase n=1 Tax=Streptobacillus moniliformis (strain ATCC 14647 / DSM 12112 / NCTC 10651 / 9901) RepID=D1AVD8_STRM9 rbh
DNA-cytosine methyltransferase rbh
SCNpilot_BF_INOC_scaffold_582_curated_52
Syntrophomonas zehnderi, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48192..48440)
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Anaerotruncus sp. G3(2012) RepID=R9LKS3_9FIRM
Cro/C1-type helix-turn-helix domain {ECO:0000313|EMBL:CFX73862.1}; TaxID=690567 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas zehnderi OL-4.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_582_curated_53
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48664..49041
DNA (378bp) protein (126aa)
Helix-turn-helix domain-containing protein id=4072864 bin=GWF2_Clostridiales_38_85 species=Clostridium sporogenes genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EHN13410.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 3679.;"
XRE family transcriptional regulator
SCNpilot_BF_INOC_scaffold_582_curated_54
Propionimicrobium lymphophilum, Propionimicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

49045..49770
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Propionimicrobium lymphophilum ACS-093-V-SCH5 RepID=S2W601_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD33670.1}; TaxID=883161 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionimicrobium.;" source="Propionimicrobium lymphophilum ACS-093-V-SCH5.;"
SCNpilot_BF_INOC_scaffold_582_curated_55
unknown

Not on your lists

49924..50157
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_582_curated_56
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50996..51169
DNA (174bp) protein (58aa)
Putative uncharacterized protein n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TCZ0_HELMI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ85441.1}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum (strain ATCC 51547 / Ice1).;"
SCNpilot_BF_INOC_scaffold_582_curated_57
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51162..51494
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TCZ1_HELMI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ85442.1}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum (strain ATCC 51547 / Ice1).;"
SCNpilot_BF_INOC_scaffold_582_curated_58
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51487..51705
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TCZ2_HELMI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ85443.1}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum (strain ATCC 51547 / Ice1).;"
Displaying items 31-58 of 58 in total

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