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SCNpilot_BF_INOC_scaffold_3090_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3090_curated_1
unknown

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comp(2..697)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Gaeumannomyces graminis var. tritici (strain R3-111a-1) RepID=J3PJD7_GAGT3
SCNpilot_BF_INOC_scaffold_3090_curated_2
Nectria haematococca, Fusarium, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

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comp(735..2174)
DNA (1440bp) protein (480aa)
Putative uncharacterized protein n=1 Tax=Nectria haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI) RepID=C7ZD94_NECH7
Putative uncharacterized protein {ECO:0000313|EMBL:EEU38055.1}; TaxID=660122 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium solani species complex.;" source="Nectria haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 /; MPVI) (Fusarium solani subsp. pisi).;"
SCNpilot_BF_INOC_scaffold_3090_curated_3
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

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comp(2229..3515)
DNA (1287bp) protein (429aa)
id=3253455 bin=GWF2_Firmicute_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=GWF2_Tenericutes_57_13_curated
SCNpilot_BF_INOC_scaffold_3090_curated_4
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4039..4983)
DNA (945bp) protein (315aa)
tktB; Transketolase subunit B (EC:2.2.1.1) rbh
Transketolase C-terminal subunit n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZY7_9FIRM rbh
Transketolase C-terminal subunit {ECO:0000313|EMBL:CDE82004.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
SCNpilot_BF_INOC_scaffold_3090_curated_5
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4983..5828)
DNA (846bp) protein (282aa)
Transketolase, N-terminal subunit (EC:2.2.1.1) rbh
Transketolase, thiamine diphosphate binding domain protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DU99_CLOS4 rbh
Transketolase, thiamine diphosphate binding domain protein {ECO:0000313|EMBL:ERJ00486.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
SCNpilot_BF_INOC_scaffold_3090_curated_6
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5825..6631)
DNA (807bp) protein (269aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U2I2_ETHHY
HAD-superfamily hydrolase
HAD-superfamily hydrolase {ECO:0000313|EMBL:CDZ24694.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_3090_curated_7
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6653..6994)
DNA (342bp) protein (114aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.- 5.4.99.12)
Pseudouridine synthase n=1 Tax=Clostridium leptum CAG:27 RepID=R6N1B0_9CLOT
Displaying 7 items

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