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SCNpilot_BF_INOC_scaffold_8882_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_8882_curated_1
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..783
DNA (783bp) protein (261aa)
ABC transporter related protein n=1 Tax=Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL) RepID=E4Q6B9_CALOW
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AKA69105.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
SCNpilot_BF_INOC_scaffold_8882_curated_2
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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785..1489
DNA (705bp) protein (235aa)
ABC-2 type transporter n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I5A3_CLOCE
ABC transporter
ABC-2 type transporter {ECO:0000313|EMBL:ACL74683.1}; Flags: Precursor;; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
SCNpilot_BF_INOC_scaffold_8882_curated_3
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2515..2820
DNA (306bp) protein (102aa)
ABC transporter n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=M4Y5W8_CLOSH
ABC transporter
Uncharacterized protein {ECO:0000313|EMBL:AGC67936.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
SCNpilot_BF_INOC_scaffold_8882_curated_4
Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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2820..4160
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002) RepID=E4SCU8_CALK2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ45081.1}; Flags: Precursor;; TaxID=632348 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 /; 2002).;"
SCNpilot_BF_INOC_scaffold_8882_curated_5
unknown

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comp(5185..5400)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_8882_curated_6
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5644..6777
DNA (1134bp) protein (378aa)
Nucleoside-diphosphate sugar epimerase n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7IAZ5_9CLOT rbh
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:ETA82481.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
polysaccharide biosynthesis protein CapD rbh
SCNpilot_BF_INOC_scaffold_8882_curated_7
unknown

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7120..7290
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_8882_curated_8
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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comp(7714..7908)
DNA (195bp) protein (65aa)
Putative stress-responsive transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WC22_9FIRM
Putative stress-responsive transcriptional regulator {ECO:0000313|EMBL:CDC91767.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
putative membrane protein
Displaying 8 items

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