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SCNpilot_BF_INOC_scaffold_2001_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2001_curated_1
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..465)
DNA (465bp) protein (155aa)
Fructose-1 6-bisphosphate aldolase class II n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6E506_9FIRM
Fructose-1 6-bisphosphate aldolase class II {ECO:0000313|EMBL:CDA92334.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
fructose-1,6-bisphosphate aldolase
SCNpilot_BF_INOC_scaffold_2001_curated_2
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(900..1745)
DNA (846bp) protein (282aa)
8-oxoguanine DNA glycosylase domain-containing protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MPQ4_9FIRM
8-oxoguanine DNA glycosylase
8-oxoguanine DNA glycosylase {ECO:0000313|EMBL:CDZ23275.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_2001_curated_3
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1873..2571
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CBV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA74103.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_2001_curated_4
Paenibacillus sp. FSL H7-0357, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2587..3486)
DNA (900bp) protein (300aa)
Transcriptional regulator, LysR family n=2 Tax=Clostridium carboxidivorans P7 RepID=C6PQ28_9CLOT
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AIQ17544.1}; TaxID=1536774 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0357.;"
SCNpilot_BF_INOC_scaffold_2001_curated_5

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3560..4282
DNA (723bp) protein (241aa)
Marine sediment metagenome DNA, contig: S12H4_S16299 {ECO:0000313|EMBL:GAJ08652.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GDSL-like lipase/acylhydrolase domain protein id=4861983 bin=GWC2_Planctomycetes_45_44 species=Leptospira biflexa genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
GDSL family lipase
SCNpilot_BF_INOC_scaffold_2001_curated_6
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

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4275..5162
DNA (888bp) protein (296aa)
Putative permease, DMT superfamily n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IDN2_9FIRM
Membrane protein {ECO:0000313|EMBL:EYE87552.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_2001_curated_7
Methanocorpusculum labreanum, Methanocorpusculum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5376..6905)
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) RepID=A2SU63_METLZ rbh
nucleic acid binding, OB-fold, tRNA/helicase-type rbh
Uncharacterized protein {ECO:0000313|EMBL:ABN07869.1}; TaxID=410358 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanocorpusculaceae; Methanocorpusculum.;" source="Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z).;"
SCNpilot_BF_INOC_scaffold_2001_curated_8
Virgibacillus sp. SK37, Virgibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6932..9184)
DNA (2253bp) protein (751aa)
hypothetical protein n=1 Tax=Bacillus coahuilensis RepID=UPI00018508F5 rbh
antibiotic export protein rbh
Antibiotic export protein {ECO:0000313|EMBL:AIF42558.1}; TaxID=403957 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Virgibacillus.;" source="Virgibacillus sp. SK37.;"
SCNpilot_BF_INOC_scaffold_2001_curated_9
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9239..9727
DNA (489bp) protein (163aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I5F5_CLOCE
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACL76691.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
Displaying 9 items

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