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SCNpilot_BF_INOC_scaffold_4361_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_4361_curated_1
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..388
DNA (387bp) protein (129aa)
membrane dipeptidase (EC:3.4.13.19)
Renal dipeptidase family protein n=1 Tax=Clostridium sp. CAG:964 RepID=R6UCN0_9CLOT
Renal dipeptidase family protein {ECO:0000313|EMBL:CDC77881.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
SCNpilot_BF_INOC_scaffold_4361_curated_2
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(379..756)
DNA (378bp) protein (126aa)
UPF0102 protein BN563_00094 n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q8G0_9FIRM
UPF0102 protein BN563_00094 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_4361_curated_3
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(760..1359)
DNA (600bp) protein (200aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
RNase HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Clostridium sp. MSTE9 RepID=J1H3D7_9CLOT
SCNpilot_BF_INOC_scaffold_4361_curated_4
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1374..2192)
DNA (819bp) protein (273aa)
Ribosome biogenesis GTPase A n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUX1_9CLOT rbh
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Ras superfamily GTP-binding protein YlqF rbh
SCNpilot_BF_INOC_scaffold_4361_curated_5
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2281..2865)
DNA (585bp) protein (195aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Signal peptidase I n=2 Tax=Clostridium RepID=A7VUX0_9CLOT
signal peptidase I
SCNpilot_BF_INOC_scaffold_4361_curated_6
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3388..4026)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6REX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32997.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_4361_curated_7
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4013..5851)
DNA (1839bp) protein (613aa)
Radical SAM domain protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MMM5_9FIRM rbh
Radical SAM domain protein {ECO:0000313|EMBL:CCY92743.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
radical SAM protein rbh
SCNpilot_BF_INOC_scaffold_4361_curated_8
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5905..6486)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI000365ECD3
Peptidase M50 family {ECO:0000313|EMBL:CDF12662.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_4361_curated_9
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6503..7306)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5YEK8_9FIRM
peptidase M23B
Uncharacterized protein {ECO:0000313|EMBL:CDA19741.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
SCNpilot_BF_INOC_scaffold_4361_curated_10
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7424..7741)
DNA (318bp) protein (106aa)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EDO60755.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EDO60755.1};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
gltA-2; oxidoreductase (EC:1.4.1.13)
Glutamate synthase (NADPH) homotetrameric n=1 Tax=Clostridium leptum CAG:27 RepID=R6MYY2_9CLOT
Displaying 10 items

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