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SCNpilot_BF_INOC_scaffold_3860_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3860_curated_1
Bacillus megaterium, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1..171
DNA (171bp) protein (57aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Bacillus megaterium WSH-002 RepID=G2RT05_BACME
yfiK; LuxR family two component transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEN89443.1}; TaxID=1006007 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus megaterium WSH-002.;"
SCNpilot_BF_INOC_scaffold_3860_curated_2
unknown

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168..263
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_3860_curated_3

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290..460
DNA (171bp) protein (57aa)
mem:Memar_0328 daunorubicin resistance ABC transporter ATPase subunit; K09687 antibiotic transport system ATP-binding protein id=95785 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Uncharacterized protein {ECO:0000313|EMBL:EKD49685.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ABC transporter ATPase
SCNpilot_BF_INOC_scaffold_3860_curated_4
Geobacillus caldoxylosilyticus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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429..1220
DNA (792bp) protein (264aa)
Uncharacterized ABC transporter ATP-binding protein YfiL n=1 Tax=Paenibacillus sp. P22 RepID=T2LYD0_9BACL
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAJ39869.1}; TaxID=1220594 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus caldoxylosilyticus NBRC 107762.;"
ABC-type multidrug transport system, ATPase component
SCNpilot_BF_INOC_scaffold_3860_curated_5
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1222..2367
DNA (1146bp) protein (382aa)
ABC transporter permease n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EN06_CLOPA
ABC-type multidrug transport system, permease component
ABC transporter permease {ECO:0000313|EMBL:EOQ11541.1}; TaxID=1085386 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VDM021.;"
SCNpilot_BF_INOC_scaffold_3860_curated_6
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2367..3509
DNA (1143bp) protein (381aa)
ABC-type multidrug transport system, permease component n=3 Tax=Dehalobacter RepID=K4L6D9_9FIRM
yfiN; ABC-type multidrug transport system, permease component
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
SCNpilot_BF_INOC_scaffold_3860_curated_7
unknown

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5339..5701
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_3860_curated_8
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6160..6591
DNA (432bp) protein (144aa)
Protein MraZ n=1 Tax=Clostridium sp. CAG:169 RepID=R6BAQ8_9CLOT
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
MraZ protein
SCNpilot_BF_INOC_scaffold_3860_curated_9
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6639..7550
DNA (912bp) protein (304aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-) rbh
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium sp. CAG:352 RepID=R6R1N0_9CLOT rbh
SCNpilot_BF_INOC_scaffold_3860_curated_10
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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7566..8072
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SHI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46186.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
SCNpilot_BF_INOC_scaffold_3860_curated_11
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8173..9036
DNA (864bp) protein (288aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
stage V sporulation protein D n=1 Tax=Clostridium sporosphaeroides RepID=UPI000380C595
Putative stage V sporulation protein D {ECO:0000313|EMBL:EJF40530.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Displaying 11 items

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