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SCNpilot_BF_INOC_scaffold_2345_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2345_curated_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1671
DNA (1671bp) protein (557aa)
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EJF42179.1}; EC=3.6.3.8 {ECO:0000313|EMBL:EJF42179.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
ATPase n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003800CEE rbh
cation transporting ATPase-like protein rbh
SCNpilot_BF_INOC_scaffold_2345_curated_2
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1699..2187
DNA (489bp) protein (163aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
Shikimate kinase n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R522_9CLOT
shikimate kinase
SCNpilot_BF_INOC_scaffold_2345_curated_3
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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2498..3274
DNA (777bp) protein (259aa)
flagellin domain-containing protein id=2753090 bin=GWF2_Clostridiales_36_10 species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute rbh
hag; flagellin
Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_BF_INOC_scaffold_2345_curated_4
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3309..4436
DNA (1128bp) protein (376aa)
HD domain-containingmetal dependent phosphohydrolase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B132_CLOA9 rbh
HD domain-containingmetal dependent phosphohydrolase rbh
HD domain-containingmetal dependent phosphohydrolase {ECO:0000313|EMBL:AFS79728.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
SCNpilot_BF_INOC_scaffold_2345_curated_5
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

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4512..6236
DNA (1725bp) protein (575aa)
Fumarate reductase/succinate dehydrogenase flavoprotein-like protein id=4290620 bin=GWC2_Planctomycetes_45_44 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good rbh
FAD dependent oxidoreductase rbh
Tax=GWF2_Lentisphaerae_44_16_curated
SCNpilot_BF_INOC_scaffold_2345_curated_6
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6251..7087
DNA (837bp) protein (279aa)
Transcriptional regulator AraC family n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H4H0_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDE34196.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
AraC family transcriptional regulator
SCNpilot_BF_INOC_scaffold_2345_curated_7
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7177..7977
DNA (801bp) protein (267aa)
Glycoside hydrolase family 4 protein {ECO:0000313|EMBL:EMS70094.1}; EC=3.2.1.86 {ECO:0000313|EMBL:EMS70094.1};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
Glycoside hydrolase family 4 protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FLQ0_9CLOT rbh
glycoside hydrolase family 4
Displaying 7 items

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