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SCNpilot_BF_INOC_scaffold_2516_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2516_curated_1
unknown

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3..131
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2516_curated_2
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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487..927
DNA (441bp) protein (147aa)
amino acid-binding protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003678A57
ACT domain protein PheB family protein {ECO:0000313|EMBL:CDC04885.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
amino acid-binding ACT protein
SCNpilot_BF_INOC_scaffold_2516_curated_3
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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2375..3688
DNA (1314bp) protein (438aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
lysC; aspartate kinase (EC:2.7.2.4) rbh
Aspartokinase n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QNK0_9FIRM rbh
SCNpilot_BF_INOC_scaffold_2516_curated_4
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3853..4830
DNA (978bp) protein (326aa)
CorA-like protein n=2 Tax=Clostridium RepID=A7VUG0_9CLOT rbh
CorA-like protein {ECO:0000313|EMBL:CDC05800.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Mg2+ and Co2+ transporters rbh
SCNpilot_BF_INOC_scaffold_2516_curated_5
unknown

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4947..5756
DNA (810bp) protein (270aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2516_curated_6
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5756..6277
DNA (522bp) protein (174aa)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UED3_RUMA7
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit {ECO:0000313|EMBL:ADU23523.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
SCNpilot_BF_INOC_scaffold_2516_curated_7
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6570..8147)
DNA (1578bp) protein (526aa)
FAD dependent oxidoreductase n=1 Tax=Clostridium leptum CAG:27 RepID=R6N569_9CLOT rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:CDC03479.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Uncharacterized FAD-dependent dehydrogenases rbh
SCNpilot_BF_INOC_scaffold_2516_curated_8
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(8140..9369)
DNA (1230bp) protein (410aa)
HI0933 family protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MNR5_9FIRM rbh
HI0933 family protein {ECO:0000313|EMBL:CDB95911.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_2516_curated_9
Paenibacillus sp. P22, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9359..9712)
DNA (354bp) protein (118aa)
L-glyceraldehyde 3-phosphate reductase {ECO:0000313|EMBL:CDN45070.1}; EC=1.1.1.- {ECO:0000313|EMBL:CDN45070.1};; Flags: Fragment;; TaxID=483908 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P22.;"
L-glyceraldehyde 3-phosphate reductase n=1 Tax=Paenibacillus sp. P22 RepID=T2LWB2_9BACL
hypothetical protein
SCNpilot_BF_INOC_scaffold_2516_curated_10
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10403..10975)
DNA (573bp) protein (191aa)
Dipicolinate synthase subunit B n=1 Tax=Clostridium sp. CAG:413 RepID=R6NML2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC09604.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
spoVFB; dipicolinate synthase subunit B
SCNpilot_BF_INOC_scaffold_2516_curated_11
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10972..11829)
DNA (858bp) protein (286aa)
Dipicolinate synthase subunit A n=6 Tax=Clostridium thermocellum RepID=A3DCH9_CLOTH
shikimate/quinate 5-dehydrogenase
Shikimate/quinate 5-dehydrogenase {ECO:0000313|EMBL:CDZ24106.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_2516_curated_12
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11990..12841)
DNA (852bp) protein (284aa)
speE; spermidine synthase SpeE (EC:2.5.1.16) rbh
Spermidine synthase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLV2_CLOSA rbh
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
SCNpilot_BF_INOC_scaffold_2516_curated_13
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12909..14357)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WHN0_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ02395.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein rbh
Displaying 13 items

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