ggKbase home page

SCNpilot_BF_INOC_scaffold_2824_curated

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2824_curated_1
unknown

Not on your lists

comp(1..183)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2824_curated_2
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

623..1474
DNA (852bp) protein (284aa)
folD; Bifunctional protein FolD (EC:1.5.1.5) rbh
Bifunctional protein FolD n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YB41_9FIRM rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_2824_curated_3
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1506..3386
DNA (1881bp) protein (627aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0NBB6_9CLOT rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJF41927.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
ABC transporter-like protein rbh
SCNpilot_BF_INOC_scaffold_2824_curated_4
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3347..4201
DNA (855bp) protein (285aa)
Cof-like hydrolase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MEK4_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CCY89968.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
HAD-superfamily hydrolase
SCNpilot_BF_INOC_scaffold_2824_curated_5
unknown

Not on your lists

comp(4061..4453)
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2824_curated_6
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4540..5682
DNA (1143bp) protein (381aa)
Transcriptional regulator, PucR family n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JM58_CELLD rbh
PucR family transcriptional regulator rbh
Transcriptional regulator, PucR family {ECO:0000313|EMBL:ADZ82269.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
SCNpilot_BF_INOC_scaffold_2824_curated_7
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5967..7259
DNA (1293bp) protein (431aa)
Class III aminotransferase n=1 Tax=Clostridium intestinale URNW RepID=U2NM35_9CLOT rbh
Class III aminotransferase {ECO:0000313|EMBL:ERK30213.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
class III aminotransferase rbh
SCNpilot_BF_INOC_scaffold_2824_curated_8
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7326..8396
DNA (1071bp) protein (357aa)
alcohol dehydrogenase n=1 Tax=Clostridium beijerinckii RepID=UPI0002FD11E6 rbh
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:ERK30881.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
iron-containing alcohol dehydrogenase rbh
SCNpilot_BF_INOC_scaffold_2824_curated_9
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8546..9388
DNA (843bp) protein (281aa)
taurine-transporting AtPase (EC:3.6.3.36) rbh
Taurine-transporting ATPase {ECO:0000313|EMBL:ADZ82277.1}; EC=3.6.3.36 {ECO:0000313|EMBL:ADZ82277.1};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Taurine-transporting ATPase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JM66_CELLD rbh
SCNpilot_BF_INOC_scaffold_2824_curated_10
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9465..10277
DNA (813bp) protein (271aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JM67_CELLD rbh
ABC transporter permease rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:ADZ82278.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
SCNpilot_BF_INOC_scaffold_2824_curated_11
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10291..11118
DNA (828bp) protein (276aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JM68_CELLD rbh
ABC transporter permease rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:ADZ82279.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
SCNpilot_BF_INOC_scaffold_2824_curated_12
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11146..12288
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JM69_CELLD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADZ82280.1}; Flags: Precursor;; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
SCNpilot_BF_INOC_scaffold_2824_curated_13
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12415..13782
DNA (1368bp) protein (456aa)
dihydropyrimidinase (EC:3.5.2.2) rbh
Dihydropyrimidinase {ECO:0000313|EMBL:ADZ82281.1}; EC=3.5.2.2 {ECO:0000313|EMBL:ADZ82281.1};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Dihydropyrimidinase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JM70_CELLD rbh
SCNpilot_BF_INOC_scaffold_2824_curated_14
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13799..14248
DNA (450bp) protein (150aa)
preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA (EC:1.3.1.1)
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA {ECO:0000313|EMBL:AGF57886.1}; EC=1.3.1.1 {ECO:0000313|EMBL:AGF57886.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MT42_9CLOT
Displaying 14 items

View Taxonomy