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SCNpilot_BF_INOC_scaffold_4675_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_4675_curated_1
Alteromonas macleodii, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..811)
DNA (810bp) protein (270aa)
Secreted serine protease n=1 Tax=Alteromonas macleodii str. 'Ionian Sea UM7' RepID=S5CCY5_ALTMA
secreted serine protease
Uncharacterized protein {ECO:0000313|EMBL:AGP98818.1}; TaxID=1300258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas macleodii str. 'Ionian Sea UM7'.;"
SCNpilot_BF_INOC_scaffold_4675_curated_2
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1131..3914)
DNA (2784bp) protein (928aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LBQ4_RUMC1
Ig-like domain-containing surface protein
Uncharacterized protein {ECO:0000313|EMBL:CBL17049.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
SCNpilot_BF_INOC_scaffold_4675_curated_3
unknown

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6293..6457
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_4675_curated_4
unknown

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7310..7648
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_4675_curated_5
unknown

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7793..7990
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_4675_curated_6
unknown

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8891..9271
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_4675_curated_7
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9918..10145)
DNA (228bp) protein (76aa)
Acyl carrier protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCW9_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
acpP; Acyl carrier protein
SCNpilot_BF_INOC_scaffold_4675_curated_8
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10389..11252
DNA (864bp) protein (288aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Clostridium sp. CAG:352 RepID=R6S2D0_9CLOT
SCNpilot_BF_INOC_scaffold_4675_curated_9
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11249..11752
DNA (504bp) protein (168aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
3-dehydroquinate dehydratase (EC:2.7.1.71 4.2.1.10)
Shikimate kinase n=1 Tax=Clostridium sp. CAG:352 RepID=R6RCY6_9CLOT
SCNpilot_BF_INOC_scaffold_4675_curated_10
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(12150..12572)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HWV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB30272.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
SCNpilot_BF_INOC_scaffold_4675_curated_11
unknown

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comp(12678..12842)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_4675_curated_12
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13807..13971
DNA (165bp) protein (55aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Clostridium sp. CAG:678 RepID=R5KIF7_9CLOT
Displaying 12 items

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