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SCNpilot_BF_INOC_scaffold_2629_curated_1

Organism: scnpilot_dereplicated_Clostridiales_2

partial RP 42 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(1..420)

Top 3 Functional Annotations

Value Algorithm Source
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 139.0
  • Bit_score: 146
  • Evalue 1.60e-32
rsgA; putative ribosome biogenesis GTPase RsgA (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 131.0
  • Bit_score: 130
  • Evalue 3.20e-28
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Clostridium sp. CAG:352 RepID=R6QUA6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 139.0
  • Bit_score: 146
  • Evalue 1.20e-32

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Taxonomy

Clostridium sp. CAG:352 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 420
ATGAATAATACTATCACAGGATTGATCATGAAAAATATCGCCGACTTCTACTATGTAGAGGTCGGCGACGCACTCATTGAGTGTAAACCCCGGGGTATTTTCAGAAAAAGCGGGGTTACACCATTGGTCGGTGATATGGTGACGGTCACCATCGGCAAGGACGGCAAAGGGATGATTGAAGAAATCGCTAAGCGGAAAAACAGCCTGGCAAGACCGCCGCTGGCCAATTTGGACAAGTTATTTATTGTATCCTCGTTGTCTGACCCAAAACCCAATGCCTTTGTGATTGATACTATGACTGTCTTTGCAGAGGACAAATCCATTGAGCCGGTAATTGTTATCAACAAATGTGATTTGTCTGACGATGACAGCATTATAAAAATCTATGAGGATGCCGGGTTCCGTGTAATAAAAACCTCG
PROTEIN sequence
Length: 140
MNNTITGLIMKNIADFYYVEVGDALIECKPRGIFRKSGVTPLVGDMVTVTIGKDGKGMIEEIAKRKNSLARPPLANLDKLFIVSSLSDPKPNAFVIDTMTVFAEDKSIEPVIVINKCDLSDDDSIIKIYEDAGFRVIKTS