ggKbase home page

SCNpilot_BF_INOC_scaffold_1939_curated_2

Organism: scnpilot_dereplicated_Clostridiales_2

partial RP 42 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(494..970)

Top 3 Functional Annotations

Value Algorithm Source
NADH dehydrogenase n=1 Tax=Clostridium arbusti RepID=UPI000288C285 similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 155.0
  • Bit_score: 246
  • Evalue 9.40e-63
NADH:ubiquinone oxidoreductase 24 kD subunit similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 155.0
  • Bit_score: 238
  • Evalue 9.50e-61
NADH dehydrogenase (Ubiquinone) 24 kDa subunit {ECO:0000313|EMBL:ABN51666.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 155.0
  • Bit_score: 234
  • Evalue 8.90e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminiclostridium thermocellum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 477
ATGAACGAAACATCGTATGTCACAGAGGTTGACCGCATCATTAAGGACCACGGGTGCAAGCAAAGTGCTGTGATTGCCATACTGCAGAGCGTGCAGGAGCATTACCGCTATCTGCCGAAGGAGGTCTTTCCGTATTTGGCGAAACGGCTGGGAATAAGCGAAGCCGGTATTTACAGTGTCGCTACCTTTTATGAAAACTTTTCGCTTCAACCAAAGGGAAAATATATCATCCGGGTTTGTGACGGAACGGCTTGTCACGTCAGAAAATCCATTCCGATTTTGGAACGGCTCCGTAAGGATTTATCCCTCAGCGAAGCAAAAGCAACCACCGACGATCTTTCCTTCACGGTGGAAACCGTATCCTGTCTGGGCGCCTGCGGTCTTGCACCTGTCATCACGGTGAACGACAAGGTATATCCTGCCATGACACCGGAAAAGGCAACAAAGCTGATAGAAGACTTGAAAGGGGAGCTGTAA
PROTEIN sequence
Length: 159
MNETSYVTEVDRIIKDHGCKQSAVIAILQSVQEHYRYLPKEVFPYLAKRLGISEAGIYSVATFYENFSLQPKGKYIIRVCDGTACHVRKSIPILERLRKDLSLSEAKATTDDLSFTVETVSCLGACGLAPVITVNDKVYPAMTPEKATKLIEDLKGEL*