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SCNpilot_BF_INOC_scaffold_2160_curated_21

Organism: scnpilot_dereplicated_Clostridiales_2

partial RP 42 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 15247..16005

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=2753068 bin=GWF2_Clostridiales_36_10 species=Roseburia intestinalis genus=Roseburia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 246.0
  • Bit_score: 240
  • Evalue 1.80e-60
fliA; RNA polymerase, sigma 28 subunit FliA similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 242.0
  • Bit_score: 226
  • Evalue 7.80e-57
Tax=GWF2_Clostridiales_36_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 246.0
  • Bit_score: 240
  • Evalue 2.60e-60

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Taxonomy

GWF2_Clostridiales_36_10_curated → Clostridiales → Bacteria

Sequences

DNA sequence
Length: 759
ATGAAAGGGACGTTATCACCTGTTATTGACGACGTGGTATGGCTGCAGTACAAGCAGACACACAATCTTGAAATACGAAACAAGATTCTGTTGTCTTATTTGGAGATTGTAAAATGCAATGCTCTGAAAATGAGTGCAGTGTATAAAAATCGTGCCGAGCTAGAGGATATTGTAAACCAAGGGATTATTGTTCTCATGGACTGTATTGAAAAATTTGATCCTGAACGAGGGATCAAATTCGATACCTTTGCGTCCATTCGCGTGCGCGGCTCCATCATTGACTACATCAGAAACCAAGATTGGGTGCCCCGAAGCCTTCGCAAAAAAGCCAAAGACATTGAAAACACCTATTTTGAGCTGCAAAACCGCTTGGGCAGAGAGGCGACCGATAGCGAGGTTGCACGGGAGCTGAATATAGACATTCATGAACTCAATCATGTCTTGAGTGAAGCAAATGCATTTTCGGTTCTTTCTTATGAAGAGCTGTTGGTGGAGAATACCCAGACCTTCAACGAAAATATCGCTGCCGATACACCGGAAAAAAAACTGCAGGACAGCGAGCTGAAGAAAGTGATTGCGCTTGCCATAGATGAATTGAACCAAAACGAAAAGACAGTGATATCCCTGTATTATTATGAAGAATTGAAACTGAAGGAAATTGCAGAGGTGCTGGATCTGACCCAGTCACGGGTATCTCAAATCCATTCCAAAGCAATTATCAAAATCAAAAACAAACTGAAAAAATATATGGACGAATAG
PROTEIN sequence
Length: 253
MKGTLSPVIDDVVWLQYKQTHNLEIRNKILLSYLEIVKCNALKMSAVYKNRAELEDIVNQGIIVLMDCIEKFDPERGIKFDTFASIRVRGSIIDYIRNQDWVPRSLRKKAKDIENTYFELQNRLGREATDSEVARELNIDIHELNHVLSEANAFSVLSYEELLVENTQTFNENIAADTPEKKLQDSELKKVIALAIDELNQNEKTVISLYYYEELKLKEIAEVLDLTQSRVSQIHSKAIIKIKNKLKKYMDE*