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SCNpilot_BF_INOC_scaffold_2160_curated

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2160_curated_1
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

1..171
DNA (171bp) protein (57aa)
Flagellar M-ring protein FliF id=2752849 bin=GWF2_Clostridiales_36_10 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_BF_INOC_scaffold_2160_curated_2
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

172..1185
DNA (1014bp) protein (338aa)
Flagellar motor switch protein FliG id=2672921 bin=GWF2_Clostridiales_38_85 species=Acetobacterium woodii genus=Acetobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212 rbh
fliG; Flagellar motor switch protein FliG rbh
Tax=GWF2_Clostridiales_38_85_curated
SCNpilot_BF_INOC_scaffold_2160_curated_3
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

1169..1924
DNA (756bp) protein (252aa)
flagellar biosynthesis/type III secretory pathway protein-like protein id=2752853 bin=GWF2_Clostridiales_36_10 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
fliH; flagellar assembly protein FliH
Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_BF_INOC_scaffold_2160_curated_4
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

1959..3266
DNA (1308bp) protein (436aa)
fliI; Flagellum-specific ATP synthase (EC:3.6.3.14) rbh
Flagellar protein export ATPase FliI id=2752857 bin=GWF2_Clostridiales_36_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_36_10 organism_group=Firmicute rbh
Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_BF_INOC_scaffold_2160_curated_5
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

3282..3734
DNA (453bp) protein (151aa)
Flagellar export protein FliJ id=2672915 bin=GWF2_Clostridiales_38_85 species=Clostridium saccharolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
fliJ; flagellar export protein FliJ
Tax=GWF2_Clostridiales_38_85_curated
SCNpilot_BF_INOC_scaffold_2160_curated_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3762..5189
DNA (1428bp) protein (476aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IMF2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57571.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
SCNpilot_BF_INOC_scaffold_2160_curated_7
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

5246..5647
DNA (402bp) protein (134aa)
Flagellar hook protein FlgD id=2752870 bin=GWF2_Clostridiales_36_10 species=Acetobacterium woodii genus=Acetobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
flgD; flagellar hook protein FlgD
Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_BF_INOC_scaffold_2160_curated_8
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5664..6068
DNA (405bp) protein (135aa)
Flagellar operon protein n=1 Tax=Butyrivibrio fibrisolvens 16/4 RepID=D4IVL7_BUTFI
flagellar operon protein
Flagellar operon protein {ECO:0000313|EMBL:CBK74810.1}; TaxID=657324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens 16/4.;"
SCNpilot_BF_INOC_scaffold_2160_curated_9
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

6220..7005
DNA (786bp) protein (262aa)
Flagellar hook protein id=2672903 bin=GWF2_Clostridiales_38_85 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
flgG; flagellar basal body rod protein FlgG
Tax=GWF2_Clostridiales_38_85_curated
SCNpilot_BF_INOC_scaffold_2160_curated_10
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

7092..7349
DNA (258bp) protein (86aa)
Flagellar FlbD family protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A1U4_MAHA5
flagellar FlbD family protein
Flagellar FlbD family protein {ECO:0000313|EMBL:AEE96060.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
SCNpilot_BF_INOC_scaffold_2160_curated_11
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7371..8072
DNA (702bp) protein (234aa)
flagellar motor switch protein FliM
Flagellar motor switch protein FliM {ECO:0000313|EMBL:CDZ23505.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
Flagellar motor switch protein FliM id=2672894 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
SCNpilot_BF_INOC_scaffold_2160_curated_12
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8080..8340
DNA (261bp) protein (87aa)
Flagellar motor switch protein FliM n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LVG7_CLOCD
Flagellar motor switch protein FliM {ECO:0000313|EMBL:KGG80746.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
flagellar motor switch protein FliM
SCNpilot_BF_INOC_scaffold_2160_curated_13
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

8358..9440
DNA (1083bp) protein (361aa)
CheC, inhibitor of MCP methylation n=4 Tax=Thermoanaerobacter RepID=B0K1R8_THEPX
Flagellar motor switch protein FliN {ECO:0000313|EMBL:KHO62540.1}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter sp. YS13.;"
flagellar motor switch protein
SCNpilot_BF_INOC_scaffold_2160_curated_14
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9481..9837
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7R1E7_9FIRM
Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains {ECO:0000313|EMBL:CDF46574.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
cheY1; chemotaxis protein CheY
SCNpilot_BF_INOC_scaffold_2160_curated_15
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

9852..10211
DNA (360bp) protein (120aa)
Putative uncharacterized protein id=2752881 bin=GWF2_Clostridiales_36_10 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
flagellar biosynthetic protein FliO
Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_BF_INOC_scaffold_2160_curated_16
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

10229..10996
DNA (768bp) protein (256aa)
Flagellar biosynthetic protein FliP id=2753053 bin=GWF2_Clostridiales_36_10 species=Clostridium sp. MSTE9 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
flagellar biosynthetic protein FliP
Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_BF_INOC_scaffold_2160_curated_17
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11018..11284
DNA (267bp) protein (89aa)
Flagellar biosynthesis protein FliQ n=1 Tax=Clostridium intestinale URNW RepID=U2PZ83_9CLOT
Flagellar biosynthesis protein FliQ {ECO:0000313|EMBL:ERK31830.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_2160_curated_18
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

11294..12070
DNA (777bp) protein (259aa)
Flagellar biosynthetic protein fliR id=2753059 bin=GWF2_Clostridiales_36_10 species=Lachnospiraceae bacterium 3_1_57FAA_CT1 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Flagellar biosynthesis pathway, component FliR
Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_BF_INOC_scaffold_2160_curated_19
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

12086..13150
DNA (1065bp) protein (355aa)
Flagellar biosynthesis protein FlhB2 id=2753062 bin=GWF2_Clostridiales_36_10 species=Acetobacterium woodii genus=Acetobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute rbh
flhB2; flagellar biosynthesis protein FlhB2 rbh
Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_BF_INOC_scaffold_2160_curated_20
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

13147..15201
DNA (2055bp) protein (685aa)
Flagellar biosynthesis protein FlhA id=2753065 bin=GWF2_Clostridiales_36_10 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute rbh
flhA; flagellar biosynthesis protein FlhA rbh
Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_BF_INOC_scaffold_2160_curated_21
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

15247..16005
DNA (759bp) protein (253aa)
RNA polymerase sigma factor id=2753068 bin=GWF2_Clostridiales_36_10 species=Roseburia intestinalis genus=Roseburia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
fliA; RNA polymerase, sigma 28 subunit FliA
Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_BF_INOC_scaffold_2160_curated_22
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

16016..16744
DNA (729bp) protein (243aa)
Flagellar basal-body rod protein FlgF id=2753071 bin=GWF2_Clostridiales_36_10 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
flagellar basal-body rod protein FlgF
Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_BF_INOC_scaffold_2160_curated_23
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

16763..17161
DNA (399bp) protein (133aa)
Flagellar basal body rod protein FlgG n=1 Tax=Arcobacter butzleri 7h1h RepID=S5PCP7_9PROT
flgG; flagellar basal body rod protein FlgG
Flagellar basal body rod protein FlgG {ECO:0000313|EMBL:AGR78156.1}; TaxID=1036172 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri 7h1h.;"
SCNpilot_BF_INOC_scaffold_2160_curated_24
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17235..17393
DNA (159bp) protein (53aa)
Flagellar hook-basal body protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZXP6_MAHA5
flagellar hook-basal body protein
Flagellar basal body rod protein FlgG {ECO:0000313|EMBL:KGG80663.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
SCNpilot_BF_INOC_scaffold_2160_curated_25
unknown

Not on your lists

17448..17750
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2160_curated_26
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

17762..18184
DNA (423bp) protein (141aa)
id=2672690 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Tax=GWF2_Clostridiales_38_85_curated
SCNpilot_BF_INOC_scaffold_2160_curated_27
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

18287..19012
DNA (726bp) protein (242aa)
Flagellar hook-associated protein 1 id=2753078 bin=GWF2_Clostridiales_36_10 species=Acetobacterium woodii genus=Acetobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
flgK; flagellar hook-associated protein 1
Tax=GWF2_Clostridiales_36_10_curated
Displaying 27 items

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