ggKbase home page

SCNpilot_BF_INOC_scaffold_2266_curated_8

Organism: scnpilot_dereplicated_Clostridiales_2

partial RP 42 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(8500..9018)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VYC2_THESW similarity UNIREF
DB: UNIREF100
  • Identity: 36.2
  • Coverage: 160.0
  • Bit_score: 106
  • Evalue 1.70e-20
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 160.0
  • Bit_score: 106
  • Evalue 4.70e-21
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGB19666.1}; TaxID=698948 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum M0795.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.2
  • Coverage: 160.0
  • Bit_score: 106
  • Evalue 2.30e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermoanaerobacterium thermosaccharolyticum → Thermoanaerobacterium → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 519
ATGAACGTTGACAGGGAAACGGATCGGGATTTTATTGAGTTCTATCAAAAATACAACCGAGCTGTATTTTATACTGCCTTACGGATGCTAAAGGATTTTTCGTTGGCAGAGGATATCATGCAGGAGGTTTTCATCCGTCTTCAAAAATCCCTACGGGAAGAGGAAGTCATCACCTATCCCGGTGCATGGCTGATGACAGTTACCAAAAACCTTTGTATCAATCTCATTCATAAAAATGCAAAAGAGCAGGTAACCGAAAGCATTGACACGGTCGTCGCTCCTTATCACGAAAATTTCACCAAAGTGGAGACGGCGGAATACATCAGAAACGTATTACATAAGCTGCCCGAAGAGGAACGGGAAATTTTTGAACTCCATGTTTTGGGCGGGCTGAAGCATGCGGAAATTGCTAAAATGATGGCGATACCGGCTTCCTCCGTCCGTTGGAAGTTTATGAATGCAAGAAAAAAACTGAAAAAAATACTGTCAGGCGAGCAGAAAGGAGGCACAGACAAATGA
PROTEIN sequence
Length: 173
MNVDRETDRDFIEFYQKYNRAVFYTALRMLKDFSLAEDIMQEVFIRLQKSLREEEVITYPGAWLMTVTKNLCINLIHKNAKEQVTESIDTVVAPYHENFTKVETAEYIRNVLHKLPEEEREIFELHVLGGLKHAEIAKMMAIPASSVRWKFMNARKKLKKILSGEQKGGTDK*