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SCNpilot_BF_INOC_scaffold_3245_curated_17

Organism: scnpilot_dereplicated_Clostridiales_2

partial RP 42 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 10939..11928

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 325.0
  • Bit_score: 391
  • Evalue 9.00e-106
tRNA-dihydrouridine synthase n=2 Tax=Clostridium RepID=A7VYP6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 325.0
  • Bit_score: 391
  • Evalue 6.40e-106
  • rbh
nifR3 family TIM-barrel protein similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 319.0
  • Bit_score: 383
  • Evalue 3.80e-104
  • rbh

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Taxonomy

[Clostridium] leptum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 990
TTGCAAATAGGCAGTTTGAAAATAGAAGGCTATGCTTGCCTGGCACCTATGGCGGGTGTGGCGGACAGAGCCATGCGGGAAATGTGCAGGGGATACGGCGCAGCTTATGTGGTCGGCGAGCTTGCCAGTGCAAAGGGGATTTCATTGGGCGACAAAAAGTCGGCCGAGCTTTTGTCTGTGTCCGATATCGAACGCCCCATGGGTACCCAGCTGTTTGGGGACGACCCGGTTGTCATGGCAAAAGCGGCACAGCGGGCCATGGCATACAGCCCCGATTTTATCGACATCAATATGGGATGTCCGGCACCCAAGGTGGTAGGAAACGGCGGGGGAAGCGCACTGATGAAAGACCCTGCACTGGCGGGCAGAATTGTGAAAGAAGTATCAAGAGCCGTTTCGGTACCTGTTACCGTGAAAATCCGTTCCGGATGGGATGATAACAGCATCAACGCTGTGGAGCTTGCCCTAATATGTGAAGAAAACGGGGCAAAGGCGATTACGGTTCATGGCAGAACCCGAAAGCAGATGTATGCGCCGCCGGTGAATCTGGACATCATCACTGCGGTCAAAAAAGCCGTCCGTGTGCGCGTCATCGGCAACGGGGATATTGATTCCGCTTCTGACGCAGCAAGCATGTATGAAACCACCGGCTGTGATTTTGTTATGGTGGGTCGGGGTGCACAAGGAAACCCGTTTTTGTTCCGCCAGATCAATGCCTATCTGGGGCAGGGTGTCACACTACCCGACGCCACGGTGAACGAAAAGATGCTGGCGCTCCTACGGCAGGTGAAAATGATGCTGGAATACAAAGGGGAACGAACCGCCATGTGCGAAGCCCGAAAGCACGCCGCATGGTACATGAAAGGCATCCACCACGCCGCCGCATATCGCAGAGAATGCGGCAGTCTGACAAAATATGAGCAGCTGGAAGAGCTGTGCTATCGCTTTTGCAAAGAAAACGATGAAAACCAAGAAACCGATGCACGCTGA
PROTEIN sequence
Length: 330
LQIGSLKIEGYACLAPMAGVADRAMREMCRGYGAAYVVGELASAKGISLGDKKSAELLSVSDIERPMGTQLFGDDPVVMAKAAQRAMAYSPDFIDINMGCPAPKVVGNGGGSALMKDPALAGRIVKEVSRAVSVPVTVKIRSGWDDNSINAVELALICEENGAKAITVHGRTRKQMYAPPVNLDIITAVKKAVRVRVIGNGDIDSASDAASMYETTGCDFVMVGRGAQGNPFLFRQINAYLGQGVTLPDATVNEKMLALLRQVKMMLEYKGERTAMCEARKHAAWYMKGIHHAAAYRRECGSLTKYEQLEELCYRFCKENDENQETDAR*