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OR_07182017_23_scaffold_408

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07182017_23_scaffold_408_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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2..553
DNA (552bp) protein (184aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037CE3E9
OmpA/MotB domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_23_scaffold_408_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(647..1309)
DNA (663bp) protein (221aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003742C04
HAD-superfamily hydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_23_scaffold_408_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1428..2195
DNA (768bp) protein (256aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000371E148
phospholipid/glycerol acyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_23_scaffold_408_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2198..2710)
DNA (513bp) protein (171aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000380F45F
thioesterase superfamily protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_23_scaffold_408_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2744..3841)
DNA (1098bp) protein (366aa)
Mandelate racemase/muconate lactonizing protein Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y0V2_9SPHI
Muconate cycloisomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_23_scaffold_408_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3924..4334
DNA (411bp) protein (137aa)
short-chain dehydrogenase/reductase SDR Tax=Bacillus coahuilensis RepID=UPI0001850F76
short-chain dehydrogenase/reductase SDR
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_23_scaffold_408_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4306..4584
DNA (279bp) protein (93aa)
Short-chain dehydrogenase/reductase SDR Tax=Gloeobacter kilaueensis JS1 RepID=U5QHD0_9CYAN
short-chain dehydrogenase/reductase SDR
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_23_scaffold_408_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4675..5859
DNA (1185bp) protein (395aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000367E201
L-proline dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_23_scaffold_408_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5944..7776)
DNA (1833bp) protein (611aa)
PAS domain S-box Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AI19_FLELS
PAS domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_23_scaffold_408_10
unknown

Not on your lists

comp(7903..8283)
DNA (381bp) protein (127aa)

This feature has no annotations

OR_07182017_23_scaffold_408_11
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8328..8933)
DNA (606bp) protein (202aa)
Endoglucanase (EC:3.2.1.4)
Cellulase bin=GWD2_Bacteroidales_45_23 species=Echinicola vietnamensis genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
OR_07182017_23_scaffold_408_12
Xanthomonas alfalfae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8966..9403)
DNA (438bp) protein (146aa)
Cellulase Tax=Xanthomonas axonopodis pv. malvacearum str. GSPB1386 RepID=K8GCV1_9XANT
egl3; cellulase
Cellulase {ECO:0000313|EMBL:AEO40343.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. citrumelo F1.;"
OR_07182017_23_scaffold_408_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9571..10197)
DNA (627bp) protein (209aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000376D8B4
two component transcriptional regulator, LuxR family
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_23_scaffold_408_14
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10407..11201
DNA (795bp) protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Thymidylate synthase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKU7_CHIPD
thymidylate synthase
OR_07182017_23_scaffold_408_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11223..11717
DNA (495bp) protein (165aa)
Dihydrofolate reductase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL10_NIAKG
dihydrofolate reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_23_scaffold_408_16
unknown

Not on your lists

11723..12190
DNA (468bp) protein (156aa)

This feature has no annotations

OR_07182017_23_scaffold_408_17

Not on your lists

12190..12987
DNA (798bp) protein (266aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000382BA3D
Methyltransferase domain protein {ECO:0000313|EMBL:AIA18482.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
O-methyltransferase-like protein
OR_07182017_23_scaffold_408_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13049..14401
DNA (1353bp) protein (451aa)
Fmu (Sun) domain protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL03_NIAKG
Fmu (Sun) domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_23_scaffold_408_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14429..15523
DNA (1095bp) protein (365aa)
Peptidoglycan-binding lysin domain protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL02_NIAKG
peptidoglycan-binding lysin domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_23_scaffold_408_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15541..16236
DNA (696bp) protein (232aa)
Rhodanese domain protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ61_CHIPD
rhodanese domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_23_scaffold_408_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16258..17172)
DNA (915bp) protein (305aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Methionyl-tRNA formyltransferase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL01_NIAKG
methionyl-tRNA formyltransferase
Displaying 21 items

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