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OR_07242016_12_scaffold_338

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_12_scaffold_338_1
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1120
DNA (1119bp) protein (373aa)
Pilus (MSHA type) biogenesis protein MshL Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U182_SULKY
pilus (msha type) biogenesis protein mshl
Pilus (MSHA type) biogenesis protein MshL {ECO:0000313|EMBL:ADR33386.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
OR_07242016_12_scaffold_338_2
RLO_Sulfuricurvum_43_24, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

1124..1933
DNA (810bp) protein (270aa)
AAA ATPase Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SBD6_9HELI
AAA ATPase
Tax=RIFCSPLOWO2_12_FULL_Sulfuricurvum_43_24_curated
OR_07242016_12_scaffold_338_3
RIFOXYD12_FULL_Sulfuricurvum_44_77_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

1926..2663
DNA (738bp) protein (246aa)
Uncharacterized protein Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SNY1_9HELI
hypothetical protein
Tax=RIFOXYD12_FULL_Sulfuricurvum_44_77_curated
OR_07242016_12_scaffold_338_4
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

2660..3205
DNA (546bp) protein (182aa)
Uncharacterized protein Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U179_SULKY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR33383.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
OR_07242016_12_scaffold_338_5
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

3217..4953
DNA (1737bp) protein (579aa)
Type II secretion system protein E Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U178_SULKY
type II secretion system protein e
Type II secretion system protein E {ECO:0000313|EMBL:ADR33382.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
OR_07242016_12_scaffold_338_6
RLO_Sulfuricurvum_43_24, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

4950..6197
DNA (1248bp) protein (416aa)
Type II secretion system f domain protein Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7T2D1_9HELI
type II secretion system f domain protein
Tax=RIFCSPLOWO2_12_FULL_Sulfuricurvum_43_24_curated
OR_07242016_12_scaffold_338_7
Candidatus Sulfuricurvum sp. RIFRC-1, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6210..8282)
DNA (2073bp) protein (691aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Candidatus Sulfuricurvum sp. RIFRC-1.;"
Uncharacterized protein Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SBE5_9HELI
hypothetical protein
OR_07242016_12_scaffold_338_8
RIFOXYD12_FULL_Sulfuricurvum_44_77_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8315..8698)
DNA (384bp) protein (128aa)
Flagellar assembly factor FliW Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SNY7_9HELI
hypothetical protein
Tax=RIFOXYD12_FULL_Sulfuricurvum_44_77_curated
OR_07242016_12_scaffold_338_9
RIFOXYD12_FULL_Sulfuricurvum_44_77_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists


8792..11410
DNA (2619bp) protein (873aa)
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U174_SULKY
Tax=RIFOXYD12_FULL_Sulfuricurvum_44_77_curated
OR_07242016_12_scaffold_338_10
RIFOXYD12_FULL_Sulfuricurvum_44_77_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

11410..11811
DNA (402bp) protein (134aa)
GCN5-related N-acetyltransferase Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U173_SULKY
N-acetyltransferase GCN5
Tax=RIFOXYD12_FULL_Sulfuricurvum_44_77_curated
OR_07242016_12_scaffold_338_11
Sulfuricurvum sp. MLSB, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

11890..12573
DNA (684bp) protein (228aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum sp. MLSB.;"
Orotidine 5'-phosphate decarboxylase Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SBF3_9HELI
hypothetical protein
OR_07242016_12_scaffold_338_trna_1
unknown

Not on your lists

12637..12723
DNA (87bp)
transferRNA Ser
OR_07242016_12_scaffold_338_trna_2
unknown

Not on your lists

12751..12824
DNA (74bp)
transferRNA Gly
OR_07242016_12_scaffold_338_12
Marinomonas ushuaiensis, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12937..13383)
DNA (447bp) protein (149aa)
Putative orphan protein Tax=Pseudoalteromonas haloplanktis (strain TAC 125) RepID=Q3IGT1_PSEHT
Membrane protein {ECO:0000313|EMBL:ETX10639.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas ushuaiensis DSM 15871.;"
hypothetical protein
OR_07242016_12_scaffold_338_13
Sulfurovum sp. FS08-3, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

13632..13844
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:KIM09049.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS08-3.;"
OR_07242016_12_scaffold_338_14
RLO_Sulfurimonas_36_12, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13948..14517)
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10) RepID=E0UPY0_SULAO
hypothetical protein
Tax=RifCSPlowO2_12_Sulfurimonas_36_12_curated
OR_07242016_12_scaffold_338_15
Candidatus Sulfuricurvum sp. RIFRC-1, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14578..15855)
DNA (1278bp) protein (426aa)
Diguanylate cyclase Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SG77_9HELI
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AFV98582.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Candidatus Sulfuricurvum sp. RIFRC-1.;"
OR_07242016_12_scaffold_338_16
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15970..16782)
DNA (813bp) protein (271aa)
Cell wall hydrolase/autolysin Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U1N7_SULKY
cell wall hydrolase/autolysin
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:ADR34510.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
OR_07242016_12_scaffold_338_17
RLO_Sulfuricurvum_43_24, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16806..17510)
DNA (705bp) protein (235aa)
Uncharacterized protein Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SEV8_9HELI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Sulfuricurvum_43_24_curated
OR_07242016_12_scaffold_338_18
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17514..18605)
DNA (1092bp) protein (364aa)
2-nitropropane dioxygenase npd Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7S5S0_9HELI
2-nitropropane dioxygenase npd
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:ADR34511.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
OR_07242016_12_scaffold_338_19
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18602..19804)
DNA (1203bp) protein (401aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
Tyrosine--tRNA ligase Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U1N9_SULKY
OR_07242016_12_scaffold_338_20
Candidatus Sulfuricurvum sp. RIFRC-1, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19808..21970)
DNA (2163bp) protein (721aa)
(P)ppGpp synthetase I SpoT/RelA Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SBH4_9HELI
(p)ppGpp synthetase I SpoT/RelA
(P)ppGpp synthetase I SpoT/RelA {ECO:0000313|EMBL:AFV98085.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Candidatus Sulfuricurvum sp. RIFRC-1.;"
OR_07242016_12_scaffold_338_21
Sulfuricurvum sp. MLSB, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21992..22207)
DNA (216bp) protein (72aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum sp. MLSB.;"
DNA-directed RNA polymerase subunit omega Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U1P1_SULKY
DNA-directed RNA polymerase subunit omega
OR_07242016_12_scaffold_338_22
Sulfuricurvum sp. MLSB, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22227..22937)
DNA (711bp) protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum sp. MLSB.;"
uridylate kinase (EC:2.7.4.22)
Uridylate kinase Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U1P2_SULKY
OR_07242016_12_scaffold_338_23
Sulfuricurvum sp. MLSB, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

23036..24355
DNA (1320bp) protein (440aa)
Uncharacterized protein Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U1P3_SULKY
Uncharacterized protein {ECO:0000313|EMBL:KFN40805.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum sp. MLSB.;"
hypothetical protein
OR_07242016_12_scaffold_338_24
Candidatus Sulfuricurvum sp. RIFRC-1, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

24357..25454
DNA (1098bp) protein (366aa)
Peptidase s1 and s6 chymotrypsin/hap Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7T2G5_9HELI
peptidase s1 and s6 chymotrypsin/hap
Peptidase s1 and s6 chymotrypsin/hap {ECO:0000313|EMBL:AFV98089.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Candidatus Sulfuricurvum sp. RIFRC-1.;"
OR_07242016_12_scaffold_338_25
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25451..26053)
DNA (603bp) protein (201aa)
Uncharacterized protein Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U1P5_SULKY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR34518.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
OR_07242016_12_scaffold_338_26
RLO_Sulfuricurvum_43_24, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

26145..28100
DNA (1956bp) protein (652aa)
Oligopeptidase A Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SP18_9HELI
oligopeptidase A
Tax=RIFCSPLOWO2_12_FULL_Sulfuricurvum_43_24_curated
OR_07242016_12_scaffold_338_27
Sulfuricurvum sp. MLSB, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

28097..29107
DNA (1011bp) protein (337aa)
Endonuclease/exonuclease/phosphatase Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SEW8_9HELI
Endonuclease {ECO:0000313|EMBL:KFN40585.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum sp. MLSB.;"
endonuclease/exonuclease/phosphatase
OR_07242016_12_scaffold_338_28
Methanothermococcus okinawensis, Methanothermococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(29094..29675)
DNA (582bp) protein (194aa)
Uncharacterized protein Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8ALB3_METOI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH06501.1}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanothermococcus.;" source="Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1).;"
Displaying items 1-30 of 48 in total

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