ggKbase home page

OR_07102018_0_5m_scaffold_205

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07102018_0_5m_scaffold_205_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2..709)
DNA (708bp) protein (236aa)
hypothetical protein, partial n=1 Tax=Cytophagales str. B6 RepID=UPI0003B3655E
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_2
unknown

Not on your lists

comp(709..885)
DNA (177bp) protein (59aa)

This feature has no annotations

OR_07102018_0_5m_scaffold_205_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(887..2686)
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GU49_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2706..4751)
DNA (2046bp) protein (682aa)
Oligopeptide transporter, OPT family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PD75_CHIPD
oligopeptide transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4769..6277)
DNA (1509bp) protein (503aa)
Amino acid/peptide transporter n=1 Tax=Niabella soli DSM 19437 RepID=H1NPZ8_9SPHI
peptide ABC transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6348..7634
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F2413
phosphoribosylamine--glycine ligase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7698..8723
DNA (1026bp) protein (342aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS3_NIAKG
MreB/Mrl family cell shape determining protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8817..9587
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377BA49
rod shape-determining protein MreC
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9584..10114
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000363C4FD
rod shape-determining protein MreD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10176..12284
DNA (2109bp) protein (703aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036078A2
peptidoglycan glycosyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12281..13627
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003789EDD
cell cycle protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13637..14395
DNA (759bp) protein (253aa)
Beta-lactamase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS8_NIAKG
beta-lactamase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(14392..14910)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003776DB3
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(14939..15508)
DNA (570bp) protein (190aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(15468..16118)
DNA (651bp) protein (217aa)
RNA polymerase sigma70 factor n=1 Tax=Segetibacter koreensis RepID=UPI00037BE707
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16204..18678
DNA (2475bp) protein (825aa)
Phosphoenolpyruvate carboxylase n=1 Tax=Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014) RepID=E4T920_RIEAD
phosphoenolpyruvate carboxylase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18679..19272)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035D96E6
HhH-GPD family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19317..19748
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB92_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19799..20707
DNA (909bp) protein (303aa)
Band 7 protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB91_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(20727..20957)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373EDE3
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21005..21940)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F53D4
peptidase M23
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


22074..24698
DNA (2625bp) protein (875aa)
alanyl-tRNA synthetase n=1 Tax=Niabella aurantiaca RepID=UPI00037DF87B
alanyl-tRNA synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

24698..26143
DNA (1446bp) protein (482aa)
gatB; glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003784491
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

26153..27292
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003789498
thiol-disulfide isomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(27449..28876)
DNA (1428bp) protein (476aa)
membrane protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B4DA84
ragb/susd domain protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(28923..32003)
DNA (3081bp) protein (1027aa)
membrane protein n=1 Tax=Pedobacter agri RepID=UPI00029AD74A
tonb-dependent receptor plug
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(32312..33772)
DNA (1461bp) protein (487aa)
Putative outer membrane protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GWI4_9SPHI
RagB/SusD domain protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(33797..36931)
DNA (3135bp) protein (1045aa)
TonB-dependent receptor plug n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K999_9BACT
TonB-dependent receptor plug
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(37037..38713)
DNA (1677bp) protein (559aa)
Exporter of the RND superfamily protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMI3_NIAKG
RND superfamily exporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_205_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(38827..39297)
DNA (471bp) protein (157aa)
Exporter of the RND superfamily protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMI3_NIAKG
RND superfamily exporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 52 in total

View Taxonomy