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This organism can only be binned in the context of its binning project SCN18_31_3_15_R4_B. Please contact the project owner (rohansach@berkeley.edu) to become a member and gain access.

OR_07102018_0_5m_scaffold_995

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07102018_0_5m_scaffold_995_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1..984
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003633F7C
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_995_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(987..1625)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BB487
beta-lactamase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_995_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1655..5059
DNA (3405bp) protein (1135aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364EE00
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_995_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5069..5863)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003717F2B
membrane protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_995_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5867..6973)
DNA (1107bp) protein (369aa)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJS1_NIAKG
Dihydroorotate dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_995_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7023..8198
DNA (1176bp) protein (392aa)
Acetyl-CoA acetyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJS0_NIAKG
acetyl-CoA acetyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_995_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8504..8890
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000376BAEF
UspA domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_995_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8887..10569)
DNA (1683bp) protein (561aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D38C0
NAD+ synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_995_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10596..11630
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000381B24E
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_995_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11627..12013)
DNA (387bp) protein (129aa)
ApaG domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMR9_NIAKG
ApaG protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_995_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12147..12662
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003793363
isocitrate dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 11 items

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