ggKbase home page

OR_07102018_0_5m_scaffold_318

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07102018_0_5m_scaffold_318_1
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..978
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SDP3_GALCS
Uncharacterized protein {ECO:0000313|EMBL:KIM09948.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
hypothetical protein
OR_07102018_0_5m_scaffold_318_2
Candidatus Magnetoovum chiemensis, Candidatus Magnetoovum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

980..2296
DNA (1317bp) protein (439aa)
PAS sensor protein n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W5D5_DESIS
PAS sensor protein {ECO:0000313|EMBL:KJR41625.1}; TaxID=1609970 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetoovum.;" source="Candidatus Magnetoovum chiemensis.;"
PAS sensor protein
OR_07102018_0_5m_scaffold_318_3
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

2286..4217
DNA (1932bp) protein (644aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Sulfurimonas gotlandica GD1 RepID=B6BN76_9HELI
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:KJU81963.1}; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;"
multi-sensor signal transduction histidine kinase
OR_07102018_0_5m_scaffold_318_4
Sulfurimonas autotrophica, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

4210..6519
DNA (2310bp) protein (770aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10) RepID=E0UUJ9_SULAO
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ADN08435.1}; TaxID=563040 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas.;" source="Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897; / OK10).;"
OR_07102018_0_5m_scaffold_318_5
Sulfurimonas gotlandica, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

6520..7827
DNA (1308bp) protein (436aa)
Putative chemotaxis protein n=1 Tax=Sulfurimonas gotlandica GD1 RepID=B6BNU7_9HELI
Signal transduction response regulator {ECO:0000313|EMBL:EHP28901.1}; TaxID=929558 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas.;" source="Sulfurimonas gotlandica (strain DSM 19862 / JCM 16533 / GD1).;"
putative response regulator
OR_07102018_0_5m_scaffold_318_6
Sulfurovum sp. FS08-3, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

8053..8304
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:KIM13322.1}; TaxID=1539065 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS08-3.;"
OR_07102018_0_5m_scaffold_318_7
Sulfurovum sp. FS08-3, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

8297..8692
DNA (396bp) protein (132aa)
Uncharacterized protein {ECO:0000313|EMBL:KIM13323.1}; TaxID=1539065 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS08-3.;"
OR_07102018_0_5m_scaffold_318_8
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8953..9336
DNA (384bp) protein (128aa)
GAF sensor hybrid histidine kinase n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WUB6_9BACT
response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal
Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
OR_07102018_0_5m_scaffold_318_9
Sulfurimonas gotlandica, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

9380..10348
DNA (969bp) protein (323aa)
Putative multi-sensor hybrid histidine kinase n=1 Tax=Sulfurimonas gotlandica GD1 RepID=B6BP30_9HELI
Putative multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EHP30920.1}; TaxID=929558 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas.;" source="Sulfurimonas gotlandica (strain DSM 19862 / JCM 16533 / GD1).;"
hypothetical protein
OR_07102018_0_5m_scaffold_318_trna_5
unknown

Not on your lists

comp(10528..10608)
DNA (81bp)
transferRNA Leu
OR_07102018_0_5m_scaffold_318_trna_4
unknown

Not on your lists

comp(10626..10699)
DNA (74bp)
transferRNA Arg
OR_07102018_0_5m_scaffold_318_trna_3
unknown

Not on your lists

comp(10719..10792)
DNA (74bp)
transferRNA Arg
OR_07102018_0_5m_scaffold_318_trna_2
unknown

Not on your lists

comp(10843..10916)
DNA (74bp)
transferRNA His
OR_07102018_0_5m_scaffold_318_trna_1
unknown

Not on your lists

comp(10962..11036)
DNA (75bp)
transferRNA Pro
OR_07102018_0_5m_scaffold_318_10
RLO_Sulfuricurvum_43_24, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

11172..12515
DNA (1344bp) protein (448aa)
Transporter n=1 Tax=Sulfurimonas gotlandica GD1 RepID=B6BGA4_9HELI
sodium:neurotransmitter symporter
Tax=RIFCSPLOWO2_12_FULL_Sulfuricurvum_43_24_curated
OR_07102018_0_5m_scaffold_318_11
Candidatus Sulfuricurvum sp. RIFRC-1, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12668..13444)
DNA (777bp) protein (259aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1249480 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Candidatus Sulfuricurvum sp. RIFRC-1.;"
Thiazole synthase n=1 Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SY41_9HELI
hypothetical protein
OR_07102018_0_5m_scaffold_318_12
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13454..14005)
DNA (552bp) protein (184aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=709032 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
Phosphoribosylglycinamide formyltransferase n=1 Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4TXA6_SULKY
phosphoribosylglycinamide formyltransferase
OR_07102018_0_5m_scaffold_318_13
RLO_Sulfuricurvum_43_24, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14002..15321)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SIZ9_9HELI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Sulfuricurvum_43_24_curated
OR_07102018_0_5m_scaffold_318_14
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

15364..16332
DNA (969bp) protein (323aa)
kpsf/gutq family protein (EC:5.3.1.13)
KpsF/GutQ family protein {ECO:0000313|EMBL:ADR32805.1}; EC=5.3.1.13 {ECO:0000313|EMBL:ADR32805.1};; TaxID=709032 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
KpsF/GutQ family protein n=1 Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4TXA8_SULKY
OR_07102018_0_5m_scaffold_318_15
Sulfuricurvum sp. MLSB, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

16329..17390
DNA (1062bp) protein (354aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1537917 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum sp. MLSB.;"
Pseudouridine synthase n=1 Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4TXA9_SULKY
RNA-binding s4 domain-containing protein
OR_07102018_0_5m_scaffold_318_16
Candidatus Sulfuricurvum sp. RIFRC-1, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

17387..17785
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SY46_9HELI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV96429.1}; TaxID=1249480 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Candidatus Sulfuricurvum sp. RIFRC-1.;"
OR_07102018_0_5m_scaffold_318_17
Candidatus Sulfuricurvum sp. RIFRC-1, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

17788..18957
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7S6Y2_9HELI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV96430.1}; TaxID=1249480 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Candidatus Sulfuricurvum sp. RIFRC-1.;"
OR_07102018_0_5m_scaffold_318_18
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18963..22463)
DNA (3501bp) protein (1167aa)
Methionine synthase (B12-dependent) {ECO:0000313|EMBL:ADR32809.1}; EC=2.1.1.13 {ECO:0000313|EMBL:ADR32809.1};; TaxID=709032 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
methionine synthase (b12-dependent) (EC:2.1.1.13)
Methionine synthase (B12-dependent) n=1 Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4TXB2_SULKY
OR_07102018_0_5m_scaffold_318_19
Candidatus Sulfuricurvum sp. RIFRC-1, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

22560..23558
DNA (999bp) protein (333aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1249480 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Candidatus Sulfuricurvum sp. RIFRC-1.;"
Uncharacterized protein n=1 Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7S1M1_9HELI
hypothetical protein
OR_07102018_0_5m_scaffold_318_20
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

23708..24241
DNA (534bp) protein (178aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=709032 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4TXB4_SULKY
OR_07102018_0_5m_scaffold_318_21
RIFOXYD12_FULL_Sulfuricurvum_44_77_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24279..25394)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SAK5_9HELI
hypothetical protein
Tax=RIFOXYD12_FULL_Sulfuricurvum_44_77_curated
OR_07102018_0_5m_scaffold_318_22
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25454..25819)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4TXF3_SULKY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR32850.1}; TaxID=709032 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
Displaying 27 items

View Taxonomy