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OR_07102018_0_5m_scaffold_335

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07102018_0_5m_scaffold_335_1

Not on your lists

comp(3..449)
DNA (447bp) protein (149aa)
CRISPR-associated protein, Csn1 family (Fragment) n=1 Tax=mine drainage metagenome RepID=T0Z690_9ZZZZ
CRISPR-associated protein, Csn1 family {ECO:0000313|EMBL:EQD40558.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
crispr-associated protein, csn1 family
OR_07102018_0_5m_scaffold_335_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(717..1271)
DNA (555bp) protein (185aa)
DJ-1 family protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX43_HALNC
DJ-1 family protein
DJ-1 family protein {ECO:0000313|EMBL:ACX97163.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_335_3
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1394..2683)
DNA (1290bp) protein (430aa)
carboxyl-terminal protease (EC:3.4.21.102)
Carboxyl-terminal protease {ECO:0000313|EMBL:ACX97162.1}; EC=3.4.21.102 {ECO:0000313|EMBL:ACX97162.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Carboxyl-terminal protease n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX42_HALNC
OR_07102018_0_5m_scaffold_335_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2828..3361)
DNA (534bp) protein (178aa)
Membrane-bound metallopeptidase n=2 Tax=Stenotrophomonas maltophilia RepID=M3GAT2_STEMA
peptidase M23
Uncharacterized protein {ECO:0000313|EMBL:EJP77947.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
OR_07102018_0_5m_scaffold_335_5
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4099..4428
DNA (330bp) protein (110aa)
Transcriptional regulator, ArsR family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX41_HALNC
arsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACX97161.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_335_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4489..4701
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX40_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX97160.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_335_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4738..5163
DNA (426bp) protein (142aa)
Rhodanese domain protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX39_HALNC
rhodanese
Rhodanese domain protein {ECO:0000313|EMBL:ACX97159.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_335_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5176..5508
DNA (333bp) protein (111aa)
Glutaredoxin 3 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX38_HALNC
glutaredoxin 3
Glutaredoxin 3 {ECO:0000313|EMBL:ACX97158.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_335_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5558..6001
DNA (444bp) protein (148aa)
Thioredoxin n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX37_HALNC
thioredoxin
Thioredoxin {ECO:0000313|EMBL:ACX97157.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_335_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6100..6594
DNA (495bp) protein (165aa)
Protein-export protein SecB n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX36_HALNC
protein-export protein SecB
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_335_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6655..7659
DNA (1005bp) protein (335aa)
glycerol-3-phosphate dehydrogenase (NAD(P)(+)) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX35_HALNC
OR_07102018_0_5m_scaffold_335_12
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7719..8006
DNA (288bp) protein (96aa)
hypothetical protein n=2 Tax=Methylotenera RepID=UPI00036C1B91
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAP53068.1}; TaxID=509169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris (strain B100).;"
OR_07102018_0_5m_scaffold_335_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7927..8679)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX34_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX97154.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_335_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8676..9161)
DNA (486bp) protein (162aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX33_HALNC
TrmH family RNA methyltransferase
OR_07102018_0_5m_scaffold_335_15
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9270..10313
DNA (1044bp) protein (348aa)
Putative permease n=1 Tax=mine drainage metagenome RepID=E6PPL3_9ZZZZ
permease
Permease {ECO:0000313|EMBL:ADG32361.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07102018_0_5m_scaffold_335_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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10344..10652
DNA (309bp) protein (103aa)
thiol-disulfide isomerase id=12498539 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
thiol-disulfide isomerase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07102018_0_5m_scaffold_335_17
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10688..11230
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUD4_THIA3
Uncharacterized protein {ECO:0000313|EMBL:CDW95133.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein
OR_07102018_0_5m_scaffold_335_18
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

11473..11952
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003673F61
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
OR_07102018_0_5m_scaffold_335_19
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12058..13344
DNA (1287bp) protein (429aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Phosphoribosylamine--glycine ligase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX32_HALNC
OR_07102018_0_5m_scaffold_335_20
Pyrolobus fumarii, Pyrolobus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

13463..14134
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EFX3_PYRF1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM39074.1}; Flags: Precursor;; TaxID=694429 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Pyrodictiaceae; Pyrolobus.;" source="Pyrolobus fumarii (strain DSM 11204 / 1A).;"
OR_07102018_0_5m_scaffold_335_21
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14194..15453)
DNA (1260bp) protein (420aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Transcription termination factor Rho n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX31_HALNC
transcription termination factor Rho
OR_07102018_0_5m_scaffold_335_22
unknown

Not on your lists

15532..15669
DNA (138bp) protein (46aa)

This feature has no annotations

OR_07102018_0_5m_scaffold_335_23
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15634..15960)
DNA (327bp) protein (109aa)
Thioredoxin n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX30_HALNC
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_335_24
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16117..17055
DNA (939bp) protein (313aa)
Transcriptional regulator, LysR family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX29_HALNC
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACX97149.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_335_25
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17072..17512)
DNA (441bp) protein (147aa)
Cold-shock DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX28_HALNC
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ACX97148.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_335_26
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17987..19867
DNA (1881bp) protein (627aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX27_HALNC
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
glucose inhibited division protein A
OR_07102018_0_5m_scaffold_335_27
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19867..20514
DNA (648bp) protein (216aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX26_HALNC
methyltransferase GidB
OR_07102018_0_5m_scaffold_335_28
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20511..21314
DNA (804bp) protein (268aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX25_HALNC
cobyrinic acid ac-diamide synthase
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ACX97145.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_335_29
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21311..22168
DNA (858bp) protein (286aa)
ParB-like partition protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX24_HALNC
parB-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:ACX97144.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_335_30
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22288..22554
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX23_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX97143.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Displaying items 1-30 of 61 in total

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