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OR_07102018_0_5m_scaffold_386

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07102018_0_5m_scaffold_386_1
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..586)
DNA (585bp) protein (195aa)
Glycolate oxidase subunit protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2ELA8_9GAMM
glcE; glycolate oxidase
Glycolate oxidase {ECO:0000313|EMBL:AHK79185.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
OR_07102018_0_5m_scaffold_386_2
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(654..2156)
DNA (1503bp) protein (501aa)
FAD-binding protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036EE7D7
FAD linked oxidase domain-containing protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:ACL73117.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
OR_07102018_0_5m_scaffold_386_3
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2177..2431)
DNA (255bp) protein (85aa)
Type III effector Hrp-dependent outers n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GTM1_THISH
Hrp-dependent type III effector protein
Type III effector Hrp-dependent outers {ECO:0000313|EMBL:ACL73115.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
OR_07102018_0_5m_scaffold_386_4
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2382..3329)
DNA (948bp) protein (316aa)
Type III effector Hrp-dependent outers n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GTM1_THISH
Hrp-dependent type III effector protein
Type III effector Hrp-dependent outers {ECO:0000313|EMBL:ACL73115.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
OR_07102018_0_5m_scaffold_386_5
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3388..5466)
DNA (2079bp) protein (693aa)
Phosphoketolase n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YA97_THIV6
phosphoketolase
Phosphoketolase {ECO:0000313|EMBL:AFL73915.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
OR_07102018_0_5m_scaffold_386_6
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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5618..6367
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI0003687E27
IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:ACL73111.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
OR_07102018_0_5m_scaffold_386_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6397..6951)
DNA (555bp) protein (185aa)
Methylated-DNA/protein-cysteine methyltransferase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L227_HALNC
methylated-DNA--protein-cysteine methyltransferase
Methylated-DNA/protein-cysteine methyltransferase {ECO:0000313|EMBL:ACX96750.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_386_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7149..8948)
DNA (1800bp) protein (600aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ATP-dependent RNA helicase DeaD n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L226_HALNC
DEAD/DEAH box helicase
OR_07102018_0_5m_scaffold_386_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9116..10327)
DNA (1212bp) protein (404aa)
Glycosyl transferase group 1 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L225_HALNC
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACX96748.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_386_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10483..11409
DNA (927bp) protein (309aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L224_HALNC
malonyl CoA-acyl carrier protein transacylase
OR_07102018_0_5m_scaffold_386_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11461..12234
DNA (774bp) protein (258aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L223_HALNC
3-oxoacyl-(acyl-carrier-protein) reductase
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ACX96746.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_386_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12411..12650
DNA (240bp) protein (80aa)
Acyl carrier protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L222_HALNC
acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_386_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12823..14064
DNA (1242bp) protein (414aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L221_HALNC
3-oxoacyl-(acyl-carrier-protein) synthase 2
OR_07102018_0_5m_scaffold_386_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14089..15585
DNA (1497bp) protein (499aa)
anthranilate synthase (EC:4.1.3.27)
Anthranilate synthase {ECO:0000313|EMBL:ACX96743.1}; EC=4.1.3.27 {ECO:0000313|EMBL:ACX96743.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Anthranilate synthase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L220_HALNC
OR_07102018_0_5m_scaffold_386_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15582..16511
DNA (930bp) protein (310aa)
Aminodeoxychorismate lyase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L219_HALNC
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:ACX96742.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_386_16
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16528..17640
DNA (1113bp) protein (371aa)
Aminodeoxychorismate lyase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L218_HALNC
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:ACX96741.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_386_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17637..18305
DNA (669bp) protein (223aa)
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Thymidylate kinase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L217_HALNC
OR_07102018_0_5m_scaffold_386_18
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18331..19362
DNA (1032bp) protein (344aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000313|EMBL:ACX96739.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ACX96739.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
DNA-directed DNA polymerase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L216_HALNC
OR_07102018_0_5m_scaffold_386_19
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19613..21421
DNA (1809bp) protein (603aa)
5'-Nucleotidase domain protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L215_HALNC
5'-Nucleotidase domain protein {ECO:0000313|EMBL:ACX96738.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
5'-nucleotidase domain-containing protein
OR_07102018_0_5m_scaffold_386_20
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21486..22028)
DNA (543bp) protein (181aa)
Putative asparaginase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L214_HALNC
asparaginase
Putative asparaginase {ECO:0000313|EMBL:ACX96737.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_386_21
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22184..22510
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L213_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96736.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07102018_0_5m_scaffold_386_22
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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22556..23908
DNA (1353bp) protein (451aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L212_HALNC
MiaB-like tRNA modifying protein YliG
OR_07102018_0_5m_scaffold_386_23
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24252..24695
DNA (444bp) protein (148aa)
Molybdenum cofactor biosynthesis protein B n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L210_HALNC
molybdenum cofactor biosynthesis protein B
Molybdenum cofactor biosynthesis protein B {ECO:0000256|PIRNR:PIRNR006443}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Displaying 23 items

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