name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_09252017_15_scaffold_2_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
3..140
|
UDP-glucuronate decarboxylase n=1 Tax=Niabella soli DSM 19437 RepID=H1NUN2_9SPHI
epimerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
RTP_09252017_15_scaffold_2_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
145..1017
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003715FA0
dTDP-4-dehydrorhamnose reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
RTP_09252017_15_scaffold_2_trna_22
unknown
|
Not on your lists |
comp(1377..1447)
|
transferRNA Gln
|
|
RTP_09252017_15_scaffold_2_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
1592..2263
|
G-D-S-L family lipolytic protein n=1 Tax=Niabella aurantiaca RepID=UPI00036DC2B2
G-D-S-L family lipolytic protein
G-D-S-L family lipolytic protein {ECO:0000313|EMBL:AHF14396.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
|
|
RTP_09252017_15_scaffold_2_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
comp(2278..3528)
|
Tyrosine--tRNA ligase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSW5_CHIPD
tyrosyl-tRNA synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
RTP_09252017_15_scaffold_2_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
3662..5518
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000379192E
molecular chaperone
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
RTP_09252017_15_scaffold_2_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
5685..5912
|
30S ribosomal protein S21 n=1 Tax=Niabella aurantiaca RepID=UPI000368EE6D
30S ribosomal protein S21
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
RTP_09252017_15_scaffold_2_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
5987..6886
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364BF1F
integrase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
RTP_09252017_15_scaffold_2_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
7014..7313
|
ribosome hibernation protein yhbh n=1 Tax=Segetibacter koreensis RepID=UPI000361BAD8
sigma-54 modulation protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
RTP_09252017_15_scaffold_2_trna_1
unknown
|
Not on your lists |
7517..7589
|
transferRNA Thr
|
|
RTP_09252017_15_scaffold_2_trna_2
unknown
|
Not on your lists |
7602..7684
|
transferRNA Tyr
|
|
RTP_09252017_15_scaffold_2_trna_3
unknown
|
Not on your lists |
7757..7829
|
transferRNA Gly
|
|
RTP_09252017_15_scaffold_2_trna_4
unknown
|
Not on your lists |
7850..7921
|
transferRNA Thr
|
|
RTP_09252017_15_scaffold_2_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
8052..9239
|
elongation factor Tu n=1 Tax=Segetibacter koreensis RepID=UPI000378845C
translation elongation factor 1A (EF-1A/EF-Tu)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
RTP_09252017_15_scaffold_2_trna_5
unknown
|
Not on your lists |
9308..9378
|
transferRNA Trp
|
|
RTP_09252017_15_scaffold_2_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
9433..9627
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036590D7
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Preprotein translocase subunit SecE
|
|
RTP_09252017_15_scaffold_2_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
9630..10247
|
transcription antitermination protein NusG n=1 Tax=Segetibacter koreensis RepID=UPI00037098FC
transcription antitermination protein nusG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
RTP_09252017_15_scaffold_2_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
10452..10895
|
50S ribosomal protein L11 n=1 Tax=Niabella aurantiaca RepID=UPI000372BDFE
50S ribosomal protein L11
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
RTP_09252017_15_scaffold_2_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
10923..11615
|
50S ribosomal protein L1 n=1 Tax=Segetibacter koreensis RepID=UPI00037ED38D
rplA; 50S ribosomal protein L1
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
RTP_09252017_15_scaffold_2_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
11664..12350
|
50S ribosomal protein L10 n=1 Tax=Niabella aurantiaca RepID=UPI0003612CAB
50S ribosomal protein L10
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
RTP_09252017_15_scaffold_2_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
12500..12868
|
50S ribosomal protein L7/L12 n=1 Tax=Niabella soli DSM 19437 RepID=H1NSW3_9SPHI
50S ribosomal protein L7
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
RTP_09252017_15_scaffold_2_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
13548..17351
|
DNA-directed RNA polymerase subunit beta n=1 Tax=Segetibacter koreensis RepID=UPI0003755D57
DNA-directed RNA polymerase subunit beta
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
RTP_09252017_15_scaffold_2_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
17422..21708
|
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Segetibacter koreensis RepID=UPI0003677F0A
DNA-directed RNA polymerase subunit beta'
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
RTP_09252017_15_scaffold_2_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
21851..22423
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003647985
outer membrane chaperone Skp
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
RTP_09252017_15_scaffold_2_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
22478..23899
|
Amino acid permease-associated region n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZE2_9SPHI
amino acid permease-associated protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
RTP_09252017_15_scaffold_2_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
23900..24910
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370AC64
PfkB domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
RTP_09252017_15_scaffold_2_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
24919..25599
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035E7B89
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
RTP_09252017_15_scaffold_2_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
comp(25665..26654)
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360ED6D
oxidoreductase domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
RTP_09252017_15_scaffold_2_23
Paraglaciecola agarilytica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26789..27988
|
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=1125747 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola agarilytica NO2.;"
anhydro-N-acetylmuramic acid kinase n=1 Tax=Pseudoalteromonas haloplanktis RepID=UPI0003146132
hypothetical protein
|
|
RTP_09252017_15_scaffold_2_24
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(28093..28917)
|
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XU27_FLAIG
putative sugar phosphate isomerase
|