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RTP_09252017_15_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 481 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_09252017_15_scaffold_9_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2..163)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ER25_RUNSL
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_9_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(348..968)
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FVW4_9FLAO
type 12 methyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_9_3
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1260..2027
DNA (768bp) protein (256aa)
Transcriptional regulator, AraC family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFI6_FLUTR
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEA45700.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
RTP_09252017_15_scaffold_9_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2104..2844
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI0003745827
Heavy metal transporter {ECO:0000313|EMBL:KIC89852.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
heavy metal transport/detoxification protein
RTP_09252017_15_scaffold_9_5
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2939..3250
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z436_BELBD
Ferredoxin {ECO:0000313|EMBL:KGD69358.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein
RTP_09252017_15_scaffold_9_6
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3540..3776)
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4AUU0_MARSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAR00343.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain HTCC2170 / KCCM 42371).;"
RTP_09252017_15_scaffold_9_7
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3806..4375)
DNA (570bp) protein (190aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CYE0_BACPM
Integrase {ECO:0000313|EMBL:AHM59301.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
recombinase
RTP_09252017_15_scaffold_9_8
unknown

Not on your lists

comp(4672..4974)
DNA (303bp) protein (101aa)

This feature has no annotations

RTP_09252017_15_scaffold_9_9
unknown

Not on your lists

5573..6529
DNA (957bp) protein (319aa)

This feature has no annotations

RTP_09252017_15_scaffold_9_10
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6536..8224
DNA (1689bp) protein (563aa)
Putative uncharacterized protein id=4527482 bin=GWA2_Flavobacterium_35_26 species=Bacteroides fragilis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
Uncharacterized protein {ECO:0000313|EMBL:EFA21619.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
RTP_09252017_15_scaffold_9_11
unknown

Not on your lists

8433..8813
DNA (381bp) protein (127aa)

This feature has no annotations

RTP_09252017_15_scaffold_9_12
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8810..10078
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI00031E3AC3
Putative uncharacterized protein {ECO:0000313|EMBL:EIA10645.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
RTP_09252017_15_scaffold_9_trna_4
unknown

Not on your lists

comp(10165..10238)
DNA (74bp)
transferRNA Met
RTP_09252017_15_scaffold_9_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10292..10921)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003732C2E
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KIC89499.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
fumarylacetoacetate (FAA) hydrolase
RTP_09252017_15_scaffold_9_14

Not on your lists

comp(10932..11513)
DNA (582bp) protein (194aa)
Peptidyl-tRNA hydrolase {ECO:0000256|RuleBase:RU000673}; EC=3.1.1.29 {ECO:0000256|RuleBase:RU000673};; TaxID=1511133 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium Zodletone_IIa.;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BFCB3
peptidyl-tRNA hydrolase
RTP_09252017_15_scaffold_9_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(11772..12359)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003608DB5
50S ribosomal protein L25P
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_9_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(12456..13451)
DNA (996bp) protein (332aa)
ribose-phosphate pyrophosphokinase n=1 Tax=Segetibacter koreensis RepID=UPI00036F7206
ribose-phosphate pyrophosphokinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_9_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13579..14271
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037DE05A
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_9_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(14286..14594)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036834C2
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_9_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14657..15535
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000363A943
bifunctional protein folD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_9_20
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15582..16163
DNA (582bp) protein (194aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
7-carboxy-7-deazaguanine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLJ8_NIAKG
radical SAM protein
RTP_09252017_15_scaffold_9_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16197..18098
DNA (1902bp) protein (634aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000378476E
OmpA/MotB domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_9_22
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18220..19317
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000381D154
DNA protecting protein DprA
Uncharacterized protein {ECO:0000313|EMBL:EGM99935.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
RTP_09252017_15_scaffold_9_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19360..20835
DNA (1476bp) protein (492aa)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9Y9_NIAKG
inosine-5'-monophosphate dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_9_24
Nitritalea halalkaliphila, Nitritalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20859..22010
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Nitritalea halalkaliphila LW7 RepID=I5C7R1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIM77863.1}; TaxID=1189621 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Nitritalea.;" source="Nitritalea halalkaliphila LW7.;"
hypothetical protein
RTP_09252017_15_scaffold_9_25
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21994..22833
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BB54B
Putative hydrolase {ECO:0000313|EMBL:GAO45588.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
alpha/beta hydrolase fold protein
RTP_09252017_15_scaffold_9_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22860..23612
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B6635
serine 3-dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_9_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(23661..24653)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370D26F
nucleotidyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_09252017_15_scaffold_9_28
Candidatus Sulcia muelleri, Candidatus Sulcia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24838..26118
DNA (1281bp) protein (427aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=374675 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Candidatus Sulcia.;" source="Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata).;"
Serine hydroxymethyltransferase n=1 Tax=Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata) RepID=Q1NYP4_9FLAO
glycine hydroxymethyltransferase
RTP_09252017_15_scaffold_9_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

26139..26540
DNA (402bp) protein (134aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 481 in total

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