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OR_09272017_19_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_09272017_19_scaffold_42_1
unknown

Not on your lists

comp(75..227)
DNA (153bp) protein (51aa)

This feature has no annotations

OR_09272017_19_scaffold_42_2
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(224..2236)
DNA (2013bp) protein (671aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DJ07_METS0
PAS/PAC sensor signal transduction histidine kinase
OR_09272017_19_scaffold_42_3
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2423..5326)
DNA (2904bp) protein (968aa)
MCP methyltransferase/methylesterase (EC:2.1.1.80 3.1.1.61)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI000366B85A
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
OR_09272017_19_scaffold_42_4
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5654..8086
DNA (2433bp) protein (811aa)
Heavy metal translocating P-type ATPase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZ93_HALNC
ATPase P
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ACX95766.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_42_5
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8098..8493
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZ94_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95767.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_42_6
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8536..8742
DNA (207bp) protein (69aa)
Heavy metal transport/detoxification protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JRF6_9GAMM
heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:AEM46461.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
OR_09272017_19_scaffold_42_7
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8739..9005
DNA (267bp) protein (89aa)
Glutaredoxin n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZUH1_ACICS
glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:AEK59620.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
OR_09272017_19_scaffold_42_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9179..9442)
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXC3_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95137.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_42_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9530..10360)
DNA (831bp) protein (277aa)
Copper resistance B n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXC2_HALNC
copper resistance B
Copper resistance B {ECO:0000313|EMBL:ACX95136.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_42_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10383..12404)
DNA (2022bp) protein (674aa)
Copper-resistance protein, CopA family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXC1_HALNC
CopA family copper-resistance protein
Copper-resistance protein, CopA family {ECO:0000313|EMBL:ACX95135.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_42_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12623..13024)
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXC0_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95134.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_42_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13149..14726)
DNA (1578bp) protein (526aa)
bilirubin oxidase (EC:1.3.3.5)
Bilirubin oxidase {ECO:0000313|EMBL:ACX95138.1}; EC=1.3.3.5 {ECO:0000313|EMBL:ACX95138.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Bilirubin oxidase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXC4_HALNC
OR_09272017_19_scaffold_42_13
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14795..15682)
DNA (888bp) protein (296aa)
H+-transporting two-sector ATPase, gamma subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Z98_RHOFD
H+-transporting two-sector ATPase subunit gamma
H+-transporting two-sector ATPase, gamma subunit {ECO:0000313|EMBL:ABD68905.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
OR_09272017_19_scaffold_42_14
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15679..17232)
DNA (1554bp) protein (518aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
ATP synthase subunit alpha n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9Q8_9PROT
ATP synthase subunit alpha
OR_09272017_19_scaffold_42_15
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17225..18016)
DNA (792bp) protein (264aa)
ATP synthase subunit b n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AF83_9PROT
H+-transporting two-sector ATPase, B/B' subunit
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
OR_09272017_19_scaffold_42_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18020..18301)
DNA (282bp) protein (94aa)
ATP synthase subunit c n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B1G2_9PROT
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
ATP synthase subunit c
OR_09272017_19_scaffold_42_17
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18331..19011)
DNA (681bp) protein (227aa)
ATP synthase subunit a n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GEQ7_NITSI
ATP synthase subunit a
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
OR_09272017_19_scaffold_42_18
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19001..19336)
DNA (336bp) protein (112aa)
F1/F0 ATPase, Methanosarcina type subunit 2 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJ13_9PROT
F1/F0 ATPase, Methanosarcina type subunit 2
F1/F0 ATPase, Methanosarcina type subunit 2 {ECO:0000313|EMBL:BAN34539.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
OR_09272017_19_scaffold_42_19
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19329..19670)
DNA (342bp) protein (114aa)
F0F1-ATPase subunit n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GEQ5_NITSI
F0F1-ATPase subunit
F0F1-ATPase subunit {ECO:0000313|EMBL:AEI99948.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
OR_09272017_19_scaffold_42_20
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19663..20067)
DNA (405bp) protein (135aa)
Alternate F1F0 ATPase, F1 subunit epsilon n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AF87_9PROT
alternate F1F0 ATPase, F1 subunit epsilon
Alternate F1F0 ATPase, F1 subunit epsilon {ECO:0000313|EMBL:BAN34541.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
OR_09272017_19_scaffold_42_21
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20042..21517)
DNA (1476bp) protein (492aa)
F0F1 ATP synthase subunit beta (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
ATP synthase subunit beta n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B1G7_9PROT
OR_09272017_19_scaffold_42_22
R_Methylotenera_45_14, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21657..22880)
DNA (1224bp) protein (408aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21S94_RHOFD
major facilitator transporter
Tax=RIFCSPLOWO2_02_FULL_Methylotenera_45_14_curated
OR_09272017_19_scaffold_42_23

Not on your lists

comp(23135..23686)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QS77_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI10099.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
OR_09272017_19_scaffold_42_24

Not on your lists

comp(23683..24981)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QS76_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI10098.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
nickel-dependent hydrogenase large subunit
OR_09272017_19_scaffold_42_25

Not on your lists

comp(24978..25850)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QS75_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI10097.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
NADH ubiquinone oxidoreductase 20 kDa subunit
OR_09272017_19_scaffold_42_26

Not on your lists

comp(25865..26698)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QS74_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI10096.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hoxU; [NiFe] hydrogenase subunit gamma
OR_09272017_19_scaffold_42_27

Not on your lists

comp(26691..27863)
DNA (1173bp) protein (391aa)
Cytochrome c3 hydrogenase alpha (Or beta) chain n=1 Tax=mine drainage metagenome RepID=E6QS73_9ZZZZ
Cytochrome c3 hydrogenase alpha (Or beta) chain {ECO:0000313|EMBL:CBI10095.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
cytochrome C
OR_09272017_19_scaffold_42_28
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27894..28937)
DNA (1044bp) protein (348aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8F4_NITMU
hydrogenase expression/formation protein HypE
Tax=RBG_16_Gamma2_64_11_curated
OR_09272017_19_scaffold_42_29
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28938..31298)
DNA (2361bp) protein (787aa)
Nickel-iron hydrogenase, carbamoyltransferase maturation factor n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T303_META2
hypF; nickel-iron hydrogenase, carbamoyltransferase maturation factor
Tax=RBG_16_Gamma2_65_34_curated
OR_09272017_19_scaffold_42_30
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31295..32428)
DNA (1134bp) protein (378aa)
Protein required for maturation of hydrogenases n=1 Tax=mine drainage metagenome RepID=E6QTH5_9ZZZZ
Hydrogenase isoenzymes formation protein HypD {ECO:0000313|EMBL:KFZ89737.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
hydrogenase expression/formation protein HypD
Displaying items 1-30 of 82 in total

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