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OR_09272017_19_scaffold_401

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_09272017_19_scaffold_401_1
unknown

Not on your lists

comp(2..64)
DNA (63bp) protein (21aa)

This feature has no annotations

OR_09272017_19_scaffold_401_2
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134..1489
DNA (1356bp) protein (452aa)
Cellulose synthase catalytic subunit (UDP-forming) (EC:2.4.1.12)
Cellulose synthase catalytic subunit (UDP-forming) {ECO:0000313|EMBL:AIA54405.1}; EC=2.4.1.12 {ECO:0000313|EMBL:AIA54405.1};; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
Cellulose synthase catalytic subunit (UDP-forming) n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NUS3_9GAMM
OR_09272017_19_scaffold_401_3
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1513..3729
DNA (2217bp) protein (739aa)
Cellulose synthase subunit B n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZSZ7_ACICS
cellulose synthase subunit B
Cellulose synthase subunit B {ECO:0000313|EMBL:AEK57141.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
OR_09272017_19_scaffold_401_4
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3716..4423
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JMX8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDQ09040.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
hypothetical protein
OR_09272017_19_scaffold_401_5
unknown

Not on your lists

4435..4560
DNA (126bp) protein (42aa)

This feature has no annotations

OR_09272017_19_scaffold_401_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4557..5492
DNA (936bp) protein (312aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1D9_HALNC
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ACX96512.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_401_7
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5330..5737)
DNA (408bp) protein (136aa)
Transposase n=2 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NWC2_AROAE
istA; transposase
Transposase {ECO:0000313|EMBL:CAI10663.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
OR_09272017_19_scaffold_401_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6017..6610)
DNA (594bp) protein (198aa)
Lytic transglycosylase catalytic n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L164_HALNC
lytic transglycosylase
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ACX96437.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_401_trna_1
unknown

Not on your lists

6036..6117
DNA (82bp)
transferRNA Leu
OR_09272017_19_scaffold_401_9
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6662..7444)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUM4_THIA3
conserved hypothetical protein; putative exported protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ88993.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_09272017_19_scaffold_401_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7577..8770)
DNA (1194bp) protein (398aa)
TraB family protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L165_HALNC
TraB family protein
TraB family protein {ECO:0000313|EMBL:ACX96438.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_401_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8767..8931)
DNA (165bp) protein (55aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L166_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96439.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_401_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8928..10973)
DNA (2046bp) protein (682aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
DNA topoisomerase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L167_HALNC
DNA topoisomerase III
OR_09272017_19_scaffold_401_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10992..11525)
DNA (534bp) protein (178aa)
Peptidase S26, conserved region n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L168_HALNC
peptidase S26
Peptidase S26, conserved region {ECO:0000313|EMBL:ACX96441.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_401_14
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11648..11884
DNA (237bp) protein (79aa)
SpoVT/AbrB domain-containing protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JTR9_9GAMM
AbrB family transcriptional regulator {ECO:0000313|EMBL:GAO35315.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
SpoVT/AbrB domain-containing protein
OR_09272017_19_scaffold_401_15
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11872..12189
DNA (318bp) protein (106aa)
transcriptional modulator of MazE/toxin, MazF; K07171 mRNA interferase [EC:3.1.-.-] id=12495257 bin=THIO_HI species=Acidithiobacillus thiooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Growth inhibitor PemK {ECO:0000313|EMBL:GAO35314.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
transcriptional modulator of MazE/toxin, MazF
OR_09272017_19_scaffold_401_16
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12306..14078)
DNA (1773bp) protein (591aa)
P-type conjugative transfer protein TrbL n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L169_HALNC
P-type conjugative transfer protein TrbL
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:ACX96442.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_401_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14174..14929)
DNA (756bp) protein (252aa)
P-type conjugative transfer protein TrbJ n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L171_HALNC
P-type conjugative transfer protein TrbJ
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:ACX96444.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_401_18
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15014..17473)
DNA (2460bp) protein (820aa)
CagE, TrbE, VirB component of type IV transporter system, conserved region n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L172_HALNC
type IV transporter system CagE/TrbE/VirB
CagE, TrbE, VirB component of type IV transporter system, conserved region {ECO:0000313|EMBL:ACX96445.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_401_19
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17479..17775)
DNA (297bp) protein (99aa)
Conjugal transfer TrbD family protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L173_HALNC
conjugal transfer proteinTrbD
Conjugal transfer TrbD family protein {ECO:0000313|EMBL:ACX96446.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_401_20
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17832..18251)
DNA (420bp) protein (140aa)
Conjugal transfer protein TrbC n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L174_HALNC
conjugal transfer protein Trbc
Conjugal transfer protein TrbC {ECO:0000313|EMBL:ACX96447.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_401_21
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18367..19407)
DNA (1041bp) protein (347aa)
P-type conjugative transfer ATPase TrbB n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L177_HALNC
P-type conjugative transfer ATPase TrbB
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:ACX96450.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_401_22
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19463..19876)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI00035F71A3
General secretion pathway protein G {ECO:0000313|EMBL:EHQ51895.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
secretion system protein G
OR_09272017_19_scaffold_401_23
BJP_IG2158_Actinobacteria_57_21, Bacteria

Not on your lists

comp(20420..20617)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EW06_9RHIZ
hypothetical protein
Tax=BJP_IG2158_Actinobacteria_57_21
OR_09272017_19_scaffold_401_24
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20947..21354)
DNA (408bp) protein (136aa)
Transcriptional regulator, XRE family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L182_HALNC
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACX96455.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_401_25
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21431..22138
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L183_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96456.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_401_26
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22242..23606
DNA (1365bp) protein (455aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L184_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96457.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_401_27
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23934..24221
DNA (288bp) protein (96aa)
Plasmid maintenance system antidote protein, XRE family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L187_HALNC
plasmid maintenance system antidote protein
Plasmid maintenance system antidote protein, XRE family {ECO:0000313|EMBL:ACX96460.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_401_28
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24281..24709
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00036A4839
hypothetical protein
Tax=CG_Rhodof_02
OR_09272017_19_scaffold_401_29
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24709..25173
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00037E08A5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI09968.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
Displaying items 1-30 of 47 in total

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