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OR_09272017_19_scaffold_570

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_09272017_19_scaffold_570_1
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..928
DNA (927bp) protein (309aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZV4_HALNC
PAS/PAC sensor-containing diguanylate cyclase
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ACX95977.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_570_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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928..1155
DNA (228bp) protein (76aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZV4_HALNC
PAS/PAC sensor-containing diguanylate cyclase
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ACX95977.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_570_trna_3
unknown

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comp(1282..1354)
DNA (73bp)
transferRNA Glu
OR_09272017_19_scaffold_570_trna_2
unknown

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comp(1359..1432)
DNA (74bp)
transferRNA Arg
OR_09272017_19_scaffold_570_trna_1
unknown

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comp(1437..1509)
DNA (73bp)
transferRNA Asn
OR_09272017_19_scaffold_570_3
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1620..2135)
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZV5_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95978.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_570_4
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2174..2644)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Aquaspirillum serpens RepID=UPI0003B41218
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP47471.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
OR_09272017_19_scaffold_570_5
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2631..4844)
DNA (2214bp) protein (738aa)
ABC transporter n=1 Tax=Aquaspirillum serpens RepID=UPI0003B3D1F4
ABC transporter ATP-binding protein
Putative ABC transporter, ATP-binding membrane component {ECO:0000313|EMBL:CAQ68735.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
OR_09272017_19_scaffold_570_6
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5015..7048
DNA (2034bp) protein (678aa)
Cyanophycin synthase (L-aspartate-adding) {ECO:0000313|EMBL:KCV66963.1}; EC=6.3.2.29 {ECO:0000313|EMBL:KCV66963.1};; EC=6.3.2.30 {ECO:0000313|EMBL:KCV66963.1};; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
cyanophycin synthetase n=1 Tax=Cupriavidus sp. WS RepID=UPI00036D3F41
cphA; cyanophycin synthetase
OR_09272017_19_scaffold_570_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7106..7936
DNA (831bp) protein (277aa)
Cyanophycin synthetase {ECO:0000313|EMBL:EIK90667.1}; EC=6.3.2.17 {ECO:0000313|EMBL:EIK90667.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
cphA1; cyanophycin synthetase (EC:6.-.-.-)
Cyanophycin synthetase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN77_9BURK
OR_09272017_19_scaffold_570_8
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7914..9389
DNA (1476bp) protein (492aa)
Cyanophycin synthetase n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PSQ7_9BURK
cyanophycin synthetase
Cyanophycin synthetase {ECO:0000313|EMBL:AHB05710.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
OR_09272017_19_scaffold_570_9

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comp(9654..14450)
DNA (4797bp) protein (1599aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A9B1F
Uncharacterized protein {ECO:0000313|EMBL:CBH96907.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein; putative exported protein; putative EAL, GGDEF, GAF, PAS/PAC domains
OR_09272017_19_scaffold_570_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14684..15025
DNA (342bp) protein (114aa)
Type IV pilus assembly PilZ n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZV7_HALNC
type IV pilus assembly PilZ
Type IV pilus assembly PilZ {ECO:0000313|EMBL:ACX95980.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_570_11
unknown

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15049..15369
DNA (321bp) protein (107aa)

This feature has no annotations

OR_09272017_19_scaffold_570_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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15537..17135
DNA (1599bp) protein (533aa)
Glycosyl transferase family 39 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZV8_HALNC
glycosyl transferase family protein
Glycosyl transferase family 39 {ECO:0000313|EMBL:ACX95981.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_570_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17176..17658
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZV9_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95982.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_570_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17683..18726
DNA (1044bp) protein (348aa)
dihydroorotase (EC:3.5.2.3)
Dihydroorotase {ECO:0000256|RuleBase:RU003440, ECO:0000256|SAAS:SAAS00189352}; EC=3.5.2.3 {ECO:0000256|RuleBase:RU003440, ECO:0000256|SAAS:SAAS00189348};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Dihydroorotase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZW0_HALNC
OR_09272017_19_scaffold_570_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18723..19841
DNA (1119bp) protein (373aa)
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
tRNA pseudouridine synthase D n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZW1_HALNC
tRNA pseudouridine synthase D TruD
OR_09272017_19_scaffold_570_16
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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19855..20841
DNA (987bp) protein (329aa)
Cation diffusion facilitator family transporter n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EM29_ACIF5
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ACH84265.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
OR_09272017_19_scaffold_570_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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20973..21314
DNA (342bp) protein (114aa)
Glutaredoxin n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZW2_HALNC
glutaredoxin-like protein
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_570_18
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21355..21783)
DNA (429bp) protein (143aa)
Fe-S metabolism associated SufE n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L012_HALNC
Fe-S metabolism associated SufE
Fe-S metabolism associated SufE {ECO:0000313|EMBL:ACX96035.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_570_19
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21776..22174)
DNA (399bp) protein (133aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L011_HALNC
iron-sulfur cluster assembly accessory protein
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:ACX96034.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_570_20
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22193..22513)
DNA (321bp) protein (107aa)
Rieske (2Fe-2S) iron-sulphur domain protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L010_HALNC
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) iron-sulphur domain protein {ECO:0000313|EMBL:ACX96033.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_570_21
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22515..23060)
DNA (546bp) protein (182aa)
FeS assembly SUF system protein SufT n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L009_HALNC
FeS assembly SUF system protein SufT
FeS assembly SUF system protein SufT {ECO:0000313|EMBL:ACX96032.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_570_22
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23077..24105)
DNA (1029bp) protein (343aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Cysteine desulfurase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L008_HALNC
SufS subfamily cysteine desulfurase
OR_09272017_19_scaffold_570_23
unknown

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comp(24089..24187)
DNA (99bp) protein (33aa)

This feature has no annotations

OR_09272017_19_scaffold_570_24
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24184..24633)
DNA (450bp) protein (150aa)
FeS assembly protein SufD n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L007_HALNC
FeS assembly protein SufD
FeS assembly protein SufD {ECO:0000313|EMBL:ACX96030.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_570_25
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24680..25291)
DNA (612bp) protein (204aa)
FeS assembly protein SufD n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L007_HALNC
FeS assembly protein SufD
FeS assembly protein SufD {ECO:0000313|EMBL:ACX96030.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_570_26
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25288..25647)
DNA (360bp) protein (120aa)
FeS assembly ATPase SufC n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L006_HALNC
FeS assembly ATPase SufC
FeS assembly ATPase SufC {ECO:0000313|EMBL:ACX96029.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_570_27
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25611..25865)
DNA (255bp) protein (85aa)
FeS assembly ATPase SufC n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L006_HALNC
FeS assembly ATPase SufC
FeS assembly ATPase SufC {ECO:0000313|EMBL:ACX96029.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Displaying items 1-30 of 31 in total

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