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OR_07102018_0_5m_scaffold_1015

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07102018_0_5m_scaffold_1015_1
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..775)
DNA (774bp) protein (258aa)
Putative 1-acylglycerol-3-phosphate O-acyltransferase {ECO:0000313|EMBL:CDW94229.1}; EC=2.3.1.51 {ECO:0000313|EMBL:CDW94229.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Phospholipid/glycerol acyltransferase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5J8_THIK1
phospholipid/glycerol acyltransferase
OR_07102018_0_5m_scaffold_1015_2
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(772..2076)
DNA (1305bp) protein (435aa)
putative Dihydroorotase-like protein (Aspartate carbamoyltransferase 44 kDa Non-catalytic chain) PyrC' (EC:3.5.2.3)
Putative Dihydroorotase-like protein (Aspartate carbamoyltransferase 44 kDa Non-catalytic chain) PyrC n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLX7_THIA3
Dihydroorotase-like protein {ECO:0000313|EMBL:CDW94230.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
OR_07102018_0_5m_scaffold_1015_3
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2073..3041)
DNA (969bp) protein (323aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Aspartate carbamoyltransferase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5J6_THIK1
aspartate carbamoyltransferase
OR_07102018_0_5m_scaffold_1015_4
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3048..3587)
DNA (540bp) protein (180aa)
putative Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase (EC:2.4.2.9)
Putative Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase {ECO:0000313|EMBL:CAZ89553.1}; EC=2.4.2.9 {ECO:0000313|EMBL:CAZ89553.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLX5_THIA3
OR_07102018_0_5m_scaffold_1015_5
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3591..3977)
DNA (387bp) protein (129aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative Holliday junction resolvase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLX4_THIA3
putative holliday junction resolvase
OR_07102018_0_5m_scaffold_1015_6
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3970..4557)
DNA (588bp) protein (196aa)
UPF0301 protein Tint_2545 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5J3_THIK1
hypothetical protein
UPF0301 protein Tint_2545 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07102018_0_5m_scaffold_1015_7
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4729..5598
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VNM5_9RHIZ
Cytochrome C biogenesis protein {ECO:0000313|EMBL:KGD86011.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
protein involved in C cytochrome biogenesis
OR_07102018_0_5m_scaffold_1015_8
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5668..6153
DNA (486bp) protein (162aa)
peroxiredoxin protein (EC:1.11.1.15)
Peroxiredoxin protein {ECO:0000313|EMBL:AJD40382.1}; EC=1.11.1.15 {ECO:0000313|EMBL:AJD40382.1};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
alkyl hydroperoxide reductase n=1 Tax=Rhizobium mongolense RepID=UPI0003B404AD
OR_07102018_0_5m_scaffold_1015_9
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6419..6727)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JT41_AGRVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM35754.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
OR_07102018_0_5m_scaffold_1015_10
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6843..7313)
DNA (471bp) protein (157aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
Ribonuclease H n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FDC3_9RHIZ
rnhA; ribonuclease H
OR_07102018_0_5m_scaffold_1015_11
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7310..8104)
DNA (795bp) protein (265aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085804}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085809};; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
Homoserine kinase n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FDC2_9RHIZ
thrB; homoserine kinase
Displaying 11 items

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