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OR_08142018_2_5m_0_1um_scaffold_78

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_1um_scaffold_78_1
unknown

Not on your lists

comp(101..592)
DNA (492bp) protein (164aa)

This feature has no annotations

OR_08142018_2_5m_0_1um_scaffold_78_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(612..1178)
DNA (567bp) protein (189aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_3
Porphyromonas gulae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1199..2494)
DNA (1296bp) protein (432aa)
Uncharacterized protein {ECO:0000313|EMBL:KGN84737.1}; TaxID=111105 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gulae.;"
OR_08142018_2_5m_0_1um_scaffold_78_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2771..3790
DNA (1020bp) protein (340aa)
Glycoside hydrolase family 43 n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EUN2_EMTOG
glycoside hydrolase family 43
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_5
unknown

Not on your lists

comp(3773..4351)
DNA (579bp) protein (193aa)

This feature has no annotations

OR_08142018_2_5m_0_1um_scaffold_78_6
unknown

Not on your lists

comp(4475..4930)
DNA (456bp) protein (152aa)

This feature has no annotations

OR_08142018_2_5m_0_1um_scaffold_78_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5000..5554)
DNA (555bp) protein (185aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_8
Porphyromonas gulae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5573..6850)
DNA (1278bp) protein (426aa)
Peptidase, M23 family n=1 Tax=Porphyromonas gingivalis F0570 RepID=U2JUS5_PORGN
Uncharacterized protein {ECO:0000313|EMBL:KGN84737.1}; TaxID=111105 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gulae.;"
hypothetical protein
OR_08142018_2_5m_0_1um_scaffold_78_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7118..7903
DNA (786bp) protein (262aa)
Response regulator receiver n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E382_9MICO
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_10
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7945..8703
DNA (759bp) protein (253aa)
Uncharacterized protein {ECO:0000313|EMBL:KFE99425.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
Uncharacterized protein id=2720759 bin=GWF1_Flavobacteria_32_7 species=Ornithobacterium rhinotracheale genus=Ornithobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
hypothetical protein
OR_08142018_2_5m_0_1um_scaffold_78_11
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8697..8954)
DNA (258bp) protein (86aa)
Addiction module toxin, Txe/YoeB family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4H3_DYAFD
Txe/YoeB family addiction module toxin
Addiction module toxin, Txe/YoeB family {ECO:0000313|EMBL:ACT94074.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
OR_08142018_2_5m_0_1um_scaffold_78_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8951..9205)
DNA (255bp) protein (85aa)
Prevent-host-death family protein id=2140614 bin=GWE2_Bacteroidetes_42_39 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
prevent-host-death family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9239..11086)
DNA (1848bp) protein (616aa)
2-oxoacid:acceptor oxidoreductase, alpha subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIL5_NIAKG
2-oxoacid:acceptor oxidoreductase subunit alpha
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11271..12038
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037AAAC7
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12168..14171
DNA (2004bp) protein (668aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000380CF58
Pyruvate dehydrogenase (acetyl-transferring), 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14181..15728
DNA (1548bp) protein (516aa)
Beta-lactamase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EBG9_RUNSL
beta-lactamase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(15730..16989)
DNA (1260bp) protein (420aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y0S2_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(16991..18790)
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GU49_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18810..20855)
DNA (2046bp) protein (682aa)
Oligopeptide transporter, OPT family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PD75_CHIPD
oligopeptide transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(20873..22381)
DNA (1509bp) protein (503aa)
Amino acid/peptide transporter n=1 Tax=Niabella soli DSM 19437 RepID=H1NPZ8_9SPHI
peptide ABC transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22452..23738
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F2413
phosphoribosylamine--glycine ligase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23802..24827
DNA (1026bp) protein (342aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS3_NIAKG
MreB/Mrl family cell shape determining protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

24921..25691
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377BA49
rod shape-determining protein MreC
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

25688..26218
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000363C4FD
rod shape-determining protein MreD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

26280..28388
DNA (2109bp) protein (703aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036078A2
peptidoglycan glycosyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

28385..29731
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003789EDD
cell cycle protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

29741..30499
DNA (759bp) protein (253aa)
Beta-lactamase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS8_NIAKG
beta-lactamase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(30496..31014)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003776DB3
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(31043..31612)
DNA (570bp) protein (190aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_78_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(31572..32222)
DNA (651bp) protein (217aa)
RNA polymerase sigma70 factor n=1 Tax=Segetibacter koreensis RepID=UPI00037BE707
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 84 in total

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