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OR_08142018_2_5m_0_1um_scaffold_269

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_1um_scaffold_269_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

221..1111
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003700405
cyanophycinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1166..1831
DNA (666bp) protein (222aa)
Lipolytic protein G-D-S-L family n=1 Tax=Niabella soli DSM 19437 RepID=H1NKV5_9SPHI
G-D-S-L family lipolytic protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1824..3137)
DNA (1314bp) protein (438aa)
Tyrosine--tRNA ligase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSW5_CHIPD
tyrosyl-tRNA synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3190..3576
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374D8BD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3651..5507
DNA (1857bp) protein (619aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000379192E
molecular chaperone
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5531..6124
DNA (594bp) protein (198aa)
riboflavin synthase subunit alpha n=1 Tax=Segetibacter koreensis RepID=UPI00037F1178
riboflavin synthase subunit alpha
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6194..6391
DNA (198bp) protein (66aa)
30S ribosomal protein S21 n=1 Tax=Niabella aurantiaca RepID=UPI000368EE6D
30S ribosomal protein S21
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6455..7351
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364BF1F
Tyrosine recombinase xerC
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7498..7797
DNA (300bp) protein (100aa)
Sigma-54 modulation protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7E8_NIAKG
sigma-54 modulation protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_trna_1
unknown

Not on your lists

7979..8051
DNA (73bp)
transferRNA Thr
OR_08142018_2_5m_0_1um_scaffold_269_trna_2
unknown

Not on your lists

8101..8183
DNA (83bp)
transferRNA Tyr
OR_08142018_2_5m_0_1um_scaffold_269_trna_3
unknown

Not on your lists

8223..8295
DNA (73bp)
transferRNA Gly
OR_08142018_2_5m_0_1um_scaffold_269_trna_4
unknown

Not on your lists

8313..8384
DNA (72bp)
transferRNA Thr
OR_08142018_2_5m_0_1um_scaffold_269_trna_5
unknown

Not on your lists

8313..8463
DNA (151bp)
transferRNA Thr
OR_08142018_2_5m_0_1um_scaffold_269_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8625..9815
DNA (1191bp) protein (397aa)
elongation factor Tu n=1 Tax=Segetibacter koreensis RepID=UPI000378845C
translation elongation factor 1A (EF-1A/EF-Tu)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_trna_6
unknown

Not on your lists

9918..9988
DNA (71bp)
transferRNA Trp
OR_08142018_2_5m_0_1um_scaffold_269_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10228..10827
DNA (600bp) protein (200aa)
transcription antitermination protein NusG n=1 Tax=Segetibacter koreensis RepID=UPI00037098FC
transcription antitermination protein nusG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10912..11769
DNA (858bp) protein (286aa)
Glycosyl transferase family 14 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y210_9SPHI
glycosyl transferase family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11790..12173
DNA (384bp) protein (128aa)
WxcM domain protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANM8_IGNAJ
WxcM domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12170..13255
DNA (1086bp) protein (362aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
erythromycin biosynthesis sensory transduction protein eryC1 n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B6BDB0
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


13373..13816
DNA (444bp) protein (148aa)
50S ribosomal protein L11 n=1 Tax=Niabella soli DSM 19437 RepID=H1NSW6_9SPHI
50S ribosomal protein L11
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


13843..14535
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG3_CHIPD
rplA; 50S ribosomal protein L1
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


14589..15101
DNA (513bp) protein (171aa)
50S ribosomal protein L10 n=1 Tax=Niabella aurantiaca RepID=UPI0003612CAB
50S ribosomal protein L10
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15200..15574
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=Niabella soli DSM 19437 RepID=H1NSW3_9SPHI
50S ribosomal protein L7
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15848..19651
DNA (3804bp) protein (1268aa)
DNA-directed RNA polymerase subunit beta n=1 Tax=Segetibacter koreensis RepID=UPI0003755D57
DNA-directed RNA polymerase subunit beta
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19681..23964
DNA (4284bp) protein (1428aa)
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Segetibacter koreensis RepID=UPI0003677F0A
DNA-directed RNA polymerase subunit beta'
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

24072..24659
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003647985
outer membrane chaperone Skp
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

24720..26153
DNA (1434bp) protein (478aa)
Amino acid permease-associated region n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZE2_9SPHI
amino acid permease-associated protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

26157..27152
DNA (996bp) protein (332aa)
PfkB domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7D2_NIAKG
PfkB domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_269_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

27304..28251
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035DCED2
isoaspartyl peptidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 35 in total

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