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OR_08142018_2_5m_0_1um_scaffold_343

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_1um_scaffold_343_1
unknown

Not on your lists

3..119
DNA (117bp) protein (39aa)

This feature has no annotations

OR_08142018_2_5m_0_1um_scaffold_343_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(171..1691)
DNA (1521bp) protein (507aa)
Quinone oxidoreductase n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2E1R5_9BACT
Alcohol dehydrogenase zinc-binding domain protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_343_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1724..2533)
DNA (810bp) protein (270aa)
glycosyl transferase family 2 n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B6DFBD
family 2 glycosyl transferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_343_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2636..3031
DNA (396bp) protein (132aa)
response regulator receiver protein n=1 Tax=Pedobacter agri RepID=UPI00029A5482
chemotaxis protein CheY
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_343_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3050..4246
DNA (1197bp) protein (399aa)
response regulator receiver protein n=1 Tax=Pedobacter agri RepID=UPI00029A9CDB
response regulator receiver protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_343_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4352..5101
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036611D3
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_343_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5102..7264
DNA (2163bp) protein (721aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SBG0_PEDSD
lipopolysaccharide biosynthesis protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_343_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7280..8464
DNA (1185bp) protein (395aa)
Cell wall biogenesis glycosyltransferase-like protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y204_9SPHI
cell wall biogenesis glycosyltransferase-like protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_343_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8475..9233
DNA (759bp) protein (253aa)
Methyltransferase FkbM family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ11_FLUTR
FkbM family methyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_343_10
unknown

Not on your lists

9266..9415
DNA (150bp) protein (50aa)

This feature has no annotations

OR_08142018_2_5m_0_1um_scaffold_343_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9415..10932
DNA (1518bp) protein (506aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037DD7C4
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_343_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10929..12122
DNA (1194bp) protein (398aa)
Glycosyl transferase group 1 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y207_9SPHI
group 1 glycosyl transferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_343_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12161..13492
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003816934
polysaccharide biosynthesis protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_343_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13496..14335
DNA (840bp) protein (280aa)
Glycosyl transferase family 14 n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EK97_RUNSL
glycosyl transferase family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_343_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(14339..14833)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GWM2_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_343_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14901..15812
DNA (912bp) protein (304aa)
Glycosyl transferase family 2 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y211_9SPHI
family 2 glycosyl transferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_343_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15821..16987
DNA (1167bp) protein (389aa)
glycosyl transferase n=1 Tax=Dyadobacter beijingensis RepID=UPI00036F4D46
family 2 glycosyl transferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_343_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

17064..17486
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371F3D2
response regulator receiver protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_343_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17483..18556)
DNA (1074bp) protein (358aa)
Peptidase M19 renal dipeptidase n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EVV4_EMTOG
peptidase M19 renal dipeptidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_343_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18696..19583)
DNA (888bp) protein (296aa)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7C9_NIAKG
dihydrodipicolinate synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_343_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19591..20601)
DNA (1011bp) protein (337aa)
acetyl-CoA carboxylase subunit alpha n=1 Tax=Segetibacter koreensis RepID=UPI0003723458
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_343_trna_1
unknown

Not on your lists

20693..20766
DNA (74bp)
transferRNA Asp
OR_08142018_2_5m_0_1um_scaffold_343_22
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21525..22205
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QTI3_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42115.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
OR_08142018_2_5m_0_1um_scaffold_343_23
unknown

Not on your lists

22523..23323
DNA (801bp) protein (267aa)

This feature has no annotations

OR_08142018_2_5m_0_1um_scaffold_343_24
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23671..24495
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C2D6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF15730.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
hypothetical protein
OR_08142018_2_5m_0_1um_scaffold_343_25
unknown

Not on your lists

24947..25903
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B3F552
OR_08142018_2_5m_0_1um_scaffold_343_26
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

25904..26233
DNA (330bp) protein (110aa)
Uncharacterized protein id=3072604 bin=GWB1_CP_36_13 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
OR_08142018_2_5m_0_1um_scaffold_343_27
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26734..26901
DNA (168bp) protein (56aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO44735.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Displaying 28 items

View Taxonomy