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OR_08142018_2_5m_0_1um_scaffold_105

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_1um_scaffold_105_1
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..306)
DNA (306bp) protein (102aa)
Transposase IS4 family protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN65_ACCPU
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ACV37251.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
OR_08142018_2_5m_0_1um_scaffold_105_trna_1
unknown

Not on your lists

comp(405..478)
DNA (74bp)
transferRNA Arg
OR_08142018_2_5m_0_1um_scaffold_105_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

616..1446
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B9ADD
cytochrome c5
Probable cytochrome c5 {ECO:0000313|EMBL:AAZ96099.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_105_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1516..2271
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A79D5
Sel1 repeat-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96098.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_105_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2354..3613)
DNA (1260bp) protein (420aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000365ED35
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_105_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3610..6681)
DNA (3072bp) protein (1024aa)
Heavy metal efflux pump CzcA id=1367022 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
heavy metal efflux pump CzcA
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_105_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6683..7756)
DNA (1074bp) protein (358aa)
Secretion protein HlyD id=1367021 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
secretion protein HlyD
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_105_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7822..8178)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000378A8DD
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_105_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8371..10332
DNA (1962bp) protein (654aa)
Putative uncharacterized protein id=1367020 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_105_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10329..10730
DNA (402bp) protein (134aa)
Cytochrome c'' id=1324206 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cytochrome c''
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_105_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10741..11274
DNA (534bp) protein (178aa)
Diheme cytochrome c id=1324207 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
diheme cytochrome c
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_105_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11284..11943
DNA (660bp) protein (220aa)
Two component Transcriptional regulator, Winged helix family id=1324208 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
two component transcriptional regulator
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_105_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11940..13316
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037207E6
periplasmic sensor signal transduction histidine kinase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_1um_scaffold_105_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13334..13729)
DNA (396bp) protein (132aa)
Uncharacterized protein id=1324210 bin=GWE1_T_denit_62_9 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_1um_scaffold_105_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13888..14199)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003816252
secretion protein HlyD
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_1um_scaffold_105_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14237..15622)
DNA (1386bp) protein (462aa)
Putative multicopper oxidase id=1324213 bin=GWE1_T_denit_62_9 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
putative multicopper oxidase
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_105_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15634..17046)
DNA (1413bp) protein (471aa)
Putative copper resistance-related lipoprotein id=1324214 bin=GWE1_T_denit_62_9 species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
copper resistance-related lipoprotein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_105_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17056..17364)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037AEA9F
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_105_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17458..17874)
DNA (417bp) protein (139aa)
hypothetical protein id=1324216 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_105_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17902..18348)
DNA (447bp) protein (149aa)
Putative uncharacterized protein id=1324217 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_105_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18496..18723)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003724E69
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_105_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18733..21441)
DNA (2709bp) protein (903aa)
Protein translocase subunit SecA id=1324219 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
protein translocase subunit secA
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_105_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21564..21995
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000367EEBE
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_1um_scaffold_105_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22236..22418)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000365C679
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_105_24
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22415..23329)
DNA (915bp) protein (305aa)
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC:3.5.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000255|HAMAP-Rule:MF_00388}; EC=3.5.1.- {ECO:0000255|HAMAP-Rule:MF_00388};; UDP-3-O-acyl-GlcNAc deacetylase {ECO:0000255|HAMAP-Rule:MF_00388}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase id=1324225 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
OR_08142018_2_5m_0_1um_scaffold_105_25
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23417..24562)
DNA (1146bp) protein (382aa)
peptidase M23 n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C1495
cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_105_26
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24689..25924)
DNA (1236bp) protein (412aa)
cell division protein FtsA n=1 Tax=Thiobacillus denitrificans RepID=UPI000362D541
cell division protein FtsA
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_105_27
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25921..26691)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000370F5C7
cell division protein FtsQ
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_105_28
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26803..27735)
DNA (933bp) protein (311aa)
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000255|HAMAP-Rule:MF_00047}; EC=6.3.2.4 {ECO:0000255|HAMAP-Rule:MF_00047};; D-Ala-D-Ala ligase {ECO:0000255|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000255|HAMAP-Rule:MF_00047}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
D-alanine--D-alanine ligase n=1 Tax=Thiobacillus thioparus RepID=UPI00037D0816
OR_08142018_2_5m_0_1um_scaffold_105_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27732..28709)
DNA (978bp) protein (326aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035CA7E5
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying items 1-30 of 77 in total

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