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OR_08142018_2_5m_0_1um_scaffold_130

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_1um_scaffold_130_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..96
DNA (96bp) protein (32aa)
Integrase core domain-containing protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XLG7_VARPD
integrase core domain-containing protein
Integrase core domain-containing protein {ECO:0000313|EMBL:AGU53303.1}; Putative transposase {ECO:0000313|EMBL:AGU52980.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
OR_08142018_2_5m_0_1um_scaffold_130_2
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(758..2404)
DNA (1647bp) protein (549aa)
Putative site-specific recombinase n=1 Tax=Azoarcus sp. KH32C RepID=H0PYB9_9RHOO
putative site-specific recombinase
Putative site-specific recombinase {ECO:0000313|EMBL:BAL23461.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
OR_08142018_2_5m_0_1um_scaffold_130_3
unknown

Not on your lists

comp(2401..2556)
DNA (156bp) protein (52aa)

This feature has no annotations

OR_08142018_2_5m_0_1um_scaffold_130_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2677..3114)
DNA (438bp) protein (146aa)
Probable site-specific integrase/recombinase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIK4_THIDA
site-specific integrase/recombinase
Probable site-specific integrase/recombinase {ECO:0000313|EMBL:AAZ97524.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_130_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3202..3819)
DNA (618bp) protein (206aa)
Probable site-specific integrase/recombinase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIK4_THIDA
site-specific integrase/recombinase
Probable site-specific integrase/recombinase {ECO:0000313|EMBL:AAZ97524.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_130_trna_2
unknown

Not on your lists

comp(3970..4042)
DNA (73bp)
transferRNA Asn
OR_08142018_2_5m_0_1um_scaffold_130_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4098..5333)
DNA (1236bp) protein (412aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA-directed DNA polymerase id=1325887 bin=GWE1_T_denit_62_9 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_130_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5432..6712)
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036656BF
cyclic nucleotide-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_130_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6752..7945)
DNA (1194bp) protein (398aa)
aminotransferase (EC:2.6.1.-)
aspartate aminotransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003626F22
Aspartate aminotransferase {ECO:0000313|EMBL:AAZ97522.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_130_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8017..10044
DNA (2028bp) protein (676aa)
excinuclease ABC subunit B n=1 Tax=Thiobacillus thioparus RepID=UPI0003794EB7
excinuclease ABC subunit B
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_130_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10037..10531
DNA (495bp) protein (165aa)
protein tyrosine phosphatase (EC:3.1.3.48)
Protein tyrosine phosphatase {ECO:0000313|EMBL:AAZ97518.1}; EC=3.1.3.48 {ECO:0000313|EMBL:AAZ97518.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
phosphotyrosine protein phosphatase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E7E42
OR_08142018_2_5m_0_1um_scaffold_130_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10601..13171)
DNA (2571bp) protein (857aa)
RNAse E (EC:3.1.4.-)
ribonuclease E n=1 Tax=Thiobacillus thioparus RepID=UPI00036E0F99
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_130_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13600..14562
DNA (963bp) protein (321aa)
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-)
Pseudouridine synthase id=1342847 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_130_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14559..15224
DNA (666bp) protein (222aa)
Putative hydrolase id=1342848 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hydrolase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_1um_scaffold_130_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15203..15583
DNA (381bp) protein (127aa)
(2Fe-2S)-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036F4CD3
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_130_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15580..16533
DNA (954bp) protein (318aa)
Protease id=1342850 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
protease
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_130_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16530..16751
DNA (222bp) protein (74aa)
Transcriptional antiterminator, Rof id=1342851 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
transcriptional antiterminator, Rof
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_130_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16855..17703
DNA (849bp) protein (283aa)
Putative uncharacterized protein id=1337896 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_130_18
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17722..17907)
DNA (186bp) protein (62aa)
Plasmid stabilization system family protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FSU6_9FIRM
plasmid stabilization system
Tax=BJP_08E140C01_Xanthomonadales_64_42
OR_08142018_2_5m_0_1um_scaffold_130_19
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18023..18208)
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J172_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGW20944.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
hypothetical protein
OR_08142018_2_5m_0_1um_scaffold_130_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18377..19858
DNA (1482bp) protein (494aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1T404_BURSG
DEAD/DEAH box helicase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_130_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19889..20596)
DNA (708bp) protein (236aa)
Probable transmembrane protein id=1342852 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
transmembrane protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_130_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20598..21191)
DNA (594bp) protein (198aa)
septum formation protein Maf n=1 Tax=Thiobacillus thioparus RepID=UPI00036F81F4
Maf-like protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_1um_scaffold_130_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21188..23032)
DNA (1845bp) protein (615aa)
pyruvate carboxylase subunit B (EC:4.1.1.3)
Oxaloacetate decarboxylase, alpha subunit id=1360991 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_130_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23035..24453)
DNA (1419bp) protein (473aa)
pyruvate carboxylase subunit A (EC:6.3.4.14)
Acetyl-CoA carboxylase, biotin carboxylase id=1360990 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_130_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24713..25003
DNA (291bp) protein (97aa)
Putative uncharacterized protein id=1360989 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_130_26
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


25065..25244
DNA (180bp) protein (60aa)
rpmF; 50S ribosomal protein L32
50S ribosomal protein L32 id=1360988 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
50S ribosomal protein L32 {ECO:0000255|HAMAP-Rule:MF_00340}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_130_27
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25295..26314
DNA (1020bp) protein (340aa)
Phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; EC=2.3.1.n2 {ECO:0000255|HAMAP-Rule:MF_00019};; Acyl-ACP phosphotransacylase {ECO:0000255|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
phosphate acyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003604250
glycerol-3-phosphate acyltransferase PlsX
OR_08142018_2_5m_0_1um_scaffold_130_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26311..27270
DNA (960bp) protein (320aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-ACP synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003612939
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_130_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27282..28205
DNA (924bp) protein (308aa)
ACP S-malonyltransferase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase id=1359362 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 1-30 of 71 in total

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