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OR_08142018_2_5m_0_1um_scaffold_172

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_1um_scaffold_172_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

260..1372
DNA (1113bp) protein (371aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase id=1333553 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_172_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1516..3921
DNA (2406bp) protein (802aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003773750
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_172_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3914..4531
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036AA70F
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_172_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4528..5307
DNA (780bp) protein (260aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Thiobacillus thioparus RepID=UPI0003609AA0
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_1um_scaffold_172_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5292..5912
DNA (621bp) protein (207aa)
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000255|HAMAP-Rule:MF_00135}; Short=PRAI {ECO:0000255|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000255|HAMAP-Rule:MF_00135};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
N-(5''''-phosphoribosyl)anthranilate isomerase n=1 Tax=Thiobacillus thioparus RepID=UPI00038179EE
OR_08142018_2_5m_0_1um_scaffold_172_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6068..7267
DNA (1200bp) protein (400aa)
tryptophan synthase subunit beta (EC:4.2.1.20)
tryptophan synthase subunit alpha n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B409F
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_1um_scaffold_172_7
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7564..7815
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YE60_9DELT
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
OR_08142018_2_5m_0_1um_scaffold_172_8
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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7910..8038
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SM62_9DELT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
OR_08142018_2_5m_0_1um_scaffold_172_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8130..8936
DNA (807bp) protein (269aa)
tryptophan synthase subunit alpha (EC:4.2.1.20)
tryptophan synthase subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI0003768D1B
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_172_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9120..9986
DNA (867bp) protein (289aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta id=1329869 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_172_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9989..11263
DNA (1275bp) protein (425aa)
Folylpolyglutamate synthetase id=1329868 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
folylpolyglutamate synthetase
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_172_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11247..11858
DNA (612bp) protein (204aa)
Putative uncharacterized protein id=1329867 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_172_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11861..12346
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036F471A
colicin V production protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_1um_scaffold_172_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12745..14268
DNA (1524bp) protein (508aa)
amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14] id=12494675 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
amidophosphoribosyltransferase (EC:2.4.2.14)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_1um_scaffold_172_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14265..15434
DNA (1170bp) protein (390aa)
O-succinylhomoserine sulfhydrylase (EC:2.5.1.48)
O-succinylhomoserine sulfhydrylase id=1329864 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_172_16
unknown

Not on your lists

15431..15541
DNA (111bp) protein (37aa)

This feature has no annotations

OR_08142018_2_5m_0_1um_scaffold_172_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15574..15957
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003694BE8
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_172_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15952..16689)
DNA (738bp) protein (246aa)
UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003778791
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_172_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16704..17195)
DNA (492bp) protein (164aa)
peptidyl-prolyl cis-trans isomerase B (EC:5.2.1.8)
cyclophilin n=1 Tax=Thiobacillus denitrificans RepID=UPI000377D93F
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_172_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17268..17837)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000364048D
TPR repeat-containing protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_172_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17953..19320
DNA (1368bp) protein (456aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] id=12494681 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000255|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00041}; Short=CysRS {ECO:0000255|HAMAP-Rule:MF_00041};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_172_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19343..19798
DNA (456bp) protein (152aa)
Putative uncharacterized protein id=1334760 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_172_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19887..20699
DNA (813bp) protein (271aa)
ABC transporter ATPase id=1334759 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC transporter ATPase
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_172_24
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20662..21480
DNA (819bp) protein (273aa)
ABC transporter permease n=1 Tax=Thiobacillus denitrificans RepID=UPI000378D033
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97852.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_172_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21481..21948
DNA (468bp) protein (156aa)
Putative ABC transporter substrate-binding protein id=1334757 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC transporter substrate-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_172_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21945..23342
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A237E
outer membrane protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_172_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23410..24042
DNA (633bp) protein (211aa)
Putative signal peptide protein id=1334755 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
signal peptide protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_172_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24039..24317
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000366E6D6
NTP binding protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_1um_scaffold_172_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24314..25222
DNA (909bp) protein (303aa)
ABC-type multidrug transporter ATPase id=1334754 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC-type multidrug transporter ATPase
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_172_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25449..26204
DNA (756bp) protein (252aa)
ABC-2 type transport system permease protein id=1334753 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC-2 type transport system permease
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 1-30 of 56 in total

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