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OR_08142018_2_5m_0_1um_scaffold_191

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_1um_scaffold_191_1
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..159)
DNA (159bp) protein (53aa)
Transposase, IS4 family protein n=2 Tax=Thiocapsa marina 5811 RepID=F9UHF2_9GAMM
Transposase, IS4 family protein {ECO:0000313|EMBL:EGV16410.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
transposase, IS4 family protein
OR_08142018_2_5m_0_1um_scaffold_191_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(251..4402)
DNA (4152bp) protein (1384aa)
NdvB n=1 Tax=Thioalkalivibrio sp. AKL11 RepID=UPI00037FC2C6
cyclic beta 1-2 glucan synthetase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_191_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4870..5643)
DNA (774bp) protein (258aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B1J2_9PROT
Crp/Fnr family transcriptional regulator
Tax=RBG_16_Gamma2_65_34_curated
OR_08142018_2_5m_0_1um_scaffold_191_4
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5668..6489)
DNA (822bp) protein (274aa)
Putative PAS/PAC sensor protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GLI1_NITSI
histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
OR_08142018_2_5m_0_1um_scaffold_191_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6537..7493)
DNA (957bp) protein (319aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SK1_RHOFD
diguanylate cyclase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_191_6
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7493..9232)
DNA (1740bp) protein (580aa)
Sensor histidine kinase AruS {ECO:0000313|EMBL:ESS71559.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ESS71559.1};; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
Sensor histidine kinase AruS n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BUN8_9GAMM
ATP-binding region, ATPase-like protein
OR_08142018_2_5m_0_1um_scaffold_191_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10042..10431
DNA (390bp) protein (130aa)
Cyclic nucleotide-binding domain protein id=1312395 bin=GWE1_T_denit_62_9 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cyclic nucleotide-binding domain-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_191_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10496..11170)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E1D85
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_191_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11577..12476
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003739FEA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96198.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_191_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12457..13509
DNA (1053bp) protein (351aa)
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase id=1355372 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_191_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13506..14600
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003672415
ABC transporter permease
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_191_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14600..15367
DNA (768bp) protein (256aa)
ABC transporter, ATP-binding protein id=1355370 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC transporter ATP-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_191_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15357..16304
DNA (948bp) protein (316aa)
ABC-type transport system periplasmic component id=1355369 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC-type transport system periplasmic component
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_191_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16301..16903
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003607F93
lipoprotein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_1um_scaffold_191_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17071..17499
DNA (429bp) protein (143aa)
Putative uncharacterized protein id=1355367 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_191_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17528..18208)
DNA (681bp) protein (227aa)
Putative uncharacterized protein id=1355366 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_191_17
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18205..18525)
DNA (321bp) protein (107aa)
hypothetical protein id=12494109 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
OR_08142018_2_5m_0_1um_scaffold_191_18
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(18535..18750)
DNA (216bp) protein (72aa)
hypothetical protein id=12494110 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41362.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
OR_08142018_2_5m_0_1um_scaffold_191_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18768..20123)
DNA (1356bp) protein (452aa)
MFS transporter n=1 Tax=Thiobacillus thioparus RepID=UPI0003777C93
transport transmembrane protein
Putative transport transmembrane protein {ECO:0000313|EMBL:AAZ96206.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_191_20
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20161..20553)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036CF7DD
death on curing protein
Tax=RBG_16_Gallionellales_57_15_curated
OR_08142018_2_5m_0_1um_scaffold_191_21
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20554..20778)
DNA (225bp) protein (75aa)
transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI0003697DB2
putative addiction module antidote
Tax=RBG_16_Gallionellales_57_15_curated
OR_08142018_2_5m_0_1um_scaffold_191_22
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20822..21055
DNA (234bp) protein (78aa)
RelE/StbE family addiction module toxin id=12497287 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=RBG_16_Gallionellales_57_15_curated
OR_08142018_2_5m_0_1um_scaffold_191_23
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21114..22568)
DNA (1455bp) protein (485aa)
syp:SYNPCC7002_A2132 DNA methyltransferase id=45480 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
OR_08142018_2_5m_0_1um_scaffold_191_24
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22574..23464)
DNA (891bp) protein (297aa)
DNA-damage-inducible protein D n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60CS7_METCA
dinD; DNA-damage-inducible protein D
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
OR_08142018_2_5m_0_1um_scaffold_191_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23493..24272)
DNA (780bp) protein (260aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
DNA-(Apurinic or apyrimidinic site) lyase id=1355129 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_191_26
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24314..24952
DNA (639bp) protein (213aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase id=1355128 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RBG_16_Gallionellales_57_15_curated
OR_08142018_2_5m_0_1um_scaffold_191_27
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24891..25535
DNA (645bp) protein (215aa)
Putative uncharacterized protein id=1355127 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RBG_16_Gallionellales_57_15_curated
OR_08142018_2_5m_0_1um_scaffold_191_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25695..27122)
DNA (1428bp) protein (476aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B id=1355126 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_191_29
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27119..27871)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YLE0_9DELT
conserved hypothetical cytosolic protein
Tax=RBG_16_Gallionellales_57_15_curated
OR_08142018_2_5m_0_1um_scaffold_191_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28717..30168)
DNA (1452bp) protein (484aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A id=1355125 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 1-30 of 52 in total

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